RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 DUOXA2Q1HG44 320 aa19.02■□□□□ 0.63
SFSWAP-207ENST00000538548 CASC4Q6P4E1 433 aa19.02■□□□□ 0.63
SFSWAP-207ENST00000538548 CCDC60Q8IWA6 550 aaPredicted RBP19.02■□□□□ 0.63
SFSWAP-207ENST00000538548 PFDN4Q9NQP4 134 aa19.02■□□□□ 0.63
SFSWAP-207ENST00000538548 INIPQ9NRY2 104 aa19.02■□□□□ 0.63
SFSWAP-207ENST00000538548 PSAT1Q9Y617 370 aa19.02■□□□□ 0.63
SFSWAP-207ENST00000538548 SCN9AQ15858 1988 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 WDR46O15213 610 aaKnown RBP19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 ZNF189O75820 626 aaPredicted RBP19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 RAD17O75943 681 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 PPARGP37231 505 aaPredicted RBP19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 MLH1P40692 756 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 TNFSF9P41273 254 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 PFKPQ01813 784 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 SEMA5AQ13591 1074 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 IKBKEQ14164 716 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 NAPRTQ6XQN6 538 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 CPSF7Q8N684 471 aaKnown RBP19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 PCDH19Q8TAB3 1148 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 SREK1Q8WXA9 508 aaKnown RBP19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 WRNIP1Q96S55 665 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 PORCNQ9H237 461 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 COQ10BQ9H8M1 238 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 TBC1D23Q9NUY8 699 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 GOLGA8QA0A0J9YX86 632 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 GOLGA8OA6NCC3 632 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 GOLGA8NF8WBI6 632 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 TADA2AO75478 443 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 C8BP07358 591 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 DPP6P42658 865 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 ATXN3P54252 364 aaPredicted RBP19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 GSTM4Q03013 218 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 HERC3Q15034 1050 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 RAB6CQ53S08 254 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 ARHGEF16Q5VV41 709 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 RWDD4Q6NW29 188 aaKnown RBP19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 GRIN3AQ8TCU5 1115 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 LRRN4Q8WUT4 740 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 GPRASP2Q96D09 838 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 PGBD4Q96DM1 585 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 COX4I2Q96KJ9 171 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 PRMT6Q96LA8 375 aaPredicted RBP19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 TMEM79Q9BSE2 394 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 GLIS2Q9BZE0 524 aaPredicted RBP19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 RAB6CQ9H0N0 254 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 ZNF358Q9NW07 568 aa19.01■□□□□ 0.63
SFSWAP-207ENST00000538548 TCF7P36402 384 aaPredicted RBP19■□□□□ 0.63
SFSWAP-207ENST00000538548 ART3Q13508 389 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 XKR3Q5GH77 459 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 PPP6R3Q5H9R7 873 aaPredicted RBP19■□□□□ 0.63
SFSWAP-207ENST00000538548 IL23RQ5VWK5 629 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 GRAMD4Q6IC98 578 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 RSBN1LQ6PCB5 846 aaPredicted RBP19■□□□□ 0.63
SFSWAP-207ENST00000538548 TNS4Q8IZW8 715 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 WDR55Q9H6Y2 383 aaPredicted RBP19■□□□□ 0.63
SFSWAP-207ENST00000538548 EFCAB1Q9HAE3 211 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 CLK4Q9HAZ1 481 aaKnown RBP19■□□□□ 0.63
SFSWAP-207ENST00000538548 C2CD4BA6NLJ0 364 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 YDJCA8MPS7 323 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 MATN2O00339 956 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 DGKIO75912 1065 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 MLNP12872 115 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 PDGFRAP16234 1089 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 C15orf59Q2T9L4 293 aaPredicted RBP19■□□□□ 0.63
SFSWAP-207ENST00000538548 LSM12Q3MHD2 195 aaKnown RBP19■□□□□ 0.63
SFSWAP-207ENST00000538548 BOLA3Q53S33 107 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 ITPRIPL1Q6GPH6 555 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 GPR141Q7Z602 305 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 GPR180Q86V85 440 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 RXFP2Q8WXD0 754 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 ISOC1Q96CN7 298 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 ACO2Q99798 780 aaKnown RBP19■□□□□ 0.63
SFSWAP-207ENST00000538548 ILKAPQ9H0C8 392 aaPredicted RBP19■□□□□ 0.63
SFSWAP-207ENST00000538548 XYLT2Q9H1B5 865 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 PRDM16Q9HAZ2 1276 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 RAVER2Q9HCJ3 691 aaKnown RBP19■□□□□ 0.63
SFSWAP-207ENST00000538548 MTMR10Q9NXD2 777 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 TXNDC16Q9P2K2 825 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 SLC8A2Q9UPR5 921 aa19■□□□□ 0.63
SFSWAP-207ENST00000538548 KPNA7A9QM74 516 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 H2AFYO75367 372 aaKnown RBP18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 GARSP41250 739 aaKnown RBP18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 OXCT1P55809 520 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 ESRRGP62508 458 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 RELAQ04206 551 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 AGR3Q8TD06 166 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 ZNF385DQ9H6B1 395 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 SNX15Q9NRS6 342 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 CDH7Q9ULB5 785 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 AP4S1Q9Y587 144 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 STX16-NPEPL1H3BU86 382 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 HDAC3O15379 428 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 MAFGO15525 162 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 SERPINB7O75635 380 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 KCNA2P16389 499 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 HMOX2P30519 316 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 CDO1Q16878 200 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 TRNP1Q6NT89 227 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 XRRA1Q6P2D8 792 aa18.99■□□□□ 0.63
SFSWAP-207ENST00000538548 DQX1Q8TE96 717 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms