RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 PTGER3P43115 390 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 STK19P49842 368 aaPredicted RBP8.67□□□□□ -1.02
SPARC-208ENST00000538026 PLK1P53350 603 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 DEUP1Q05D60 604 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 C1QBPQ07021 282 aaKnown RBP8.67□□□□□ -1.02
SPARC-208ENST00000538026 ZNF252P-AS1Q0IIN9 211 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 SPEM2Q0P670 501 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 CAMK2GQ13555 558 aaPredicted RBP8.67□□□□□ -1.02
SPARC-208ENST00000538026 EIF4HQ15056 248 aaKnown RBP8.67□□□□□ -1.02
SPARC-208ENST00000538026 FILIP1LQ4L180 1135 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 PITRM1Q5JRX3 1037 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 MANEALQ5VSG8 457 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 PMS2CLQ68D20 193 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 LRSAM1Q6UWE0 723 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 TRMT11Q7Z4G4 463 aaKnown RBP8.67□□□□□ -1.02
SPARC-208ENST00000538026 FAM131BQ86XD5 332 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 MFN1Q8IWA4 741 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 DEFB119Q8N690 84 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 CCDC185Q8N715 623 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 ATP6V0D2Q8N8Y2 350 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 C3orf20Q8ND61 904 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 WFIKKN2Q8TEU8 576 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 VOPP1Q96AW1 172 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 C1orf74Q96LT6 269 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 PSMB7Q99436 277 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 EDEM3Q9BZQ6 932 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 XPO4Q9C0E2 1151 aaKnown RBP8.67□□□□□ -1.02
SPARC-208ENST00000538026 SIK2Q9H0K1 926 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 ARRDC1-AS1Q9H2J1 176 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 WDCPQ9H6R7 721 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 POLMQ9NP87 494 aaPredicted RBP8.67□□□□□ -1.02
SPARC-208ENST00000538026 PRSS16Q9NQE7 514 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 TMEM74BQ9NUR3 256 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 NDFIP2Q9NV92 336 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 RRN3Q9NYV6 651 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 MPP6Q9NZW5 540 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 NENFQ9UMX5 172 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 TBC1D30Q9Y2I9 924 aa8.67□□□□□ -1.02
SPARC-208ENST00000538026 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 A0A1W2PQJ5 194 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 TTC34A8MYJ7 566 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 C10orf142B7Z368 130 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 F5H5T6 163 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 ATMINO43313 823 aaPredicted RBP8.66□□□□□ -1.02
SPARC-208ENST00000538026 GDF9O60383 454 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 CAVIN2O95810 425 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 MT-CO1P00395 513 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 SLC2A3P11169 496 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 KRT3P12035 628 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 VAV1P15498 845 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 PTMSP20962 102 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 ABCB4P21439 1286 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 TNFAIP3P21580 790 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 RDXP35241 583 aaKnown RBP8.66□□□□□ -1.02
SPARC-208ENST00000538026 ADRA1BP35368 520 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 PTPN9P43378 593 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 NSFP46459 744 aaKnown RBP8.66□□□□□ -1.02
SPARC-208ENST00000538026 SNX16P57768 344 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 MAMLD1Q13495 774 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 SF3A2Q15428 464 aaKnown RBP8.66□□□□□ -1.02
SPARC-208ENST00000538026 ASIC2Q16515 512 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 CDO1Q16878 200 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 PLEKHG6Q3KR16 790 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 USP39Q53GS9 565 aaKnown RBP8.66□□□□□ -1.02
SPARC-208ENST00000538026 BRMS1LQ5PSV4 323 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 C9orf64Q5T6V5 341 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 SFMBT2Q5VUG0 894 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 TCEAL6Q6IPX3 200 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 PLEKHA7Q6IQ23 1121 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 NUDT18Q6ZVK8 323 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 CYP4V2Q6ZWL3 525 aaPredicted RBP8.66□□□□□ -1.02
SPARC-208ENST00000538026 CEP68Q76N32 757 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 TMPRSS6Q8IU80 811 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 SLC41A1Q8IVJ1 513 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 TMEFF1Q8IYR6 380 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 AHI1Q8N157 1196 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 PYROXD2Q8N2H3 581 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 RNF214Q8ND24 703 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 FRS2Q8WU20 508 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 CPLX3Q8WVH0 158 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 TCEAL3Q969E4 200 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 RNF34Q969K3 372 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 RMDN1Q96DB5 314 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 RPL10LQ96L21 214 aaKnown RBP8.66□□□□□ -1.02
SPARC-208ENST00000538026 RPRD1AQ96P16 312 aaPredicted RBP8.66□□□□□ -1.02
SPARC-208ENST00000538026 HAPLN3Q96S86 360 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 FAM129BQ96TA1 746 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 DDX50Q9BQ39 737 aaKnown RBP8.66□□□□□ -1.02
SPARC-208ENST00000538026 FEM1AQ9BSK4 669 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 SEMA4GQ9NTN9 838 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 KIAA1522Q9P206 1035 aaPredicted RBP8.66□□□□□ -1.02
SPARC-208ENST00000538026 USP36Q9P275 1121 aaKnown RBP8.66□□□□□ -1.02
SPARC-208ENST00000538026 CAPN11Q9UMQ6 739 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 CYP8B1Q9UNU6 501 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 ERVW-1Q9UQF0 538 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.66□□□□□ -1.02
SPARC-208ENST00000538026 SLCO1B1Q9Y6L6 691 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 PCDH15Q96QU1 1955 aa8.66□□□□□ -1.02
SPARC-208ENST00000538026 A0A0D9SEW6 157 aa8.65□□□□□ -1.02
SPARC-208ENST00000538026 A0A1B0GVM2 712 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms