RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 ZRSR2Q15696 482 aaKnown RBP14.25□□□□□ -0.13
LPCAT3-203ENST00000535479 C11orf91Q3C1V1 193 aa14.25□□□□□ -0.13
LPCAT3-203ENST00000535479 NOMO2Q5JPE7 1267 aa14.25□□□□□ -0.13
LPCAT3-203ENST00000535479 METTL7BQ6UX53 244 aa14.25□□□□□ -0.13
LPCAT3-203ENST00000535479 RBM44Q6ZP01 1051 aaKnown RBP14.25□□□□□ -0.13
LPCAT3-203ENST00000535479 PDSS2Q86YH6 399 aa14.25□□□□□ -0.13
LPCAT3-203ENST00000535479 CPNE9Q8IYJ1 553 aa14.25□□□□□ -0.13
LPCAT3-203ENST00000535479 CXorf38Q8TB03 319 aa14.25□□□□□ -0.13
LPCAT3-203ENST00000535479 EDEM1Q92611 657 aa14.25□□□□□ -0.13
LPCAT3-203ENST00000535479 PRPF18Q99633 342 aaKnown RBP14.25□□□□□ -0.13
LPCAT3-203ENST00000535479 KLHL8Q9P2G9 620 aaPredicted RBP14.25□□□□□ -0.13
LPCAT3-203ENST00000535479 NUDT5Q9UKK9 219 aa14.25□□□□□ -0.13
LPCAT3-203ENST00000535479 PDE4DIPQ5VU43 2346 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 B4GALT4O60513 344 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 VDRP11473 427 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 COX4I1P13073 169 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 HNRNPLP14866 589 aaKnown RBP eCLIP14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 CPA3P15088 417 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 TKTP29401 623 aaKnown RBP14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 SULT1E1P49888 294 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 NAGLUP54802 743 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 SLC6A3Q01959 620 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 ADIGQ0VDE8 80 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 ZNF567Q8N184 647 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 B4GALNT2Q8NHY0 566 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 ZNF512Q96ME7 567 aaPredicted RBP14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 GORASP1Q9BQQ3 440 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 NXF3Q9H4D5 531 aaKnown RBP14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 IL1RL2Q9HB29 575 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 COPG2Q9UBF2 871 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 SSX2IPQ9Y2D8 614 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 TTC24A2A3L6 582 aaPredicted RBP14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 XPO1O14980 1071 aaKnown RBP14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 MAGEB3O15480 346 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 MCCD1P59942 119 aaPredicted RBP14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 ABCE1P61221 599 aaKnown RBP14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 CDKL1Q00532 357 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 CTBP1Q13363 440 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 FAM47CQ5HY64 1035 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 FSTL4Q6MZW2 842 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 SNRNP27Q8WVK2 155 aaKnown RBP14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 SPATC1LQ9H0A9 340 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 RNF39Q9H2S5 420 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 PPME1Q9Y570 386 aa14.24□□□□□ -0.13
LPCAT3-203ENST00000535479 C15orf38-AP3S2A0A0A6YYH1 394 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 ATP6AP2A0A1C7CYW4 349 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 SPTLC1O15269 473 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 ATP6AP2O75787 350 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 CYP2C8P10632 490 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 PTPN1P18031 435 aaKnown RBP14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 MAPK10P53779 464 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 TTLL12Q14166 644 aaPredicted RBP14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 PAN2Q504Q3 1202 aaKnown RBP14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 ARPINQ7Z6K5 226 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 AMIGO2Q86SJ2 522 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 TDRD5Q8NAT2 981 aaKnown RBP14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 FNIP1Q8TF40 1166 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 DIS3LQ8TF46 1054 aaKnown RBP14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 KLRG1Q96E93 195 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 FZD8Q9H461 694 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 TASP1Q9H6P5 420 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 STK32BQ9NY57 414 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 HOXC10Q9NYD6 342 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 A0A096LPK6 155 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 IGKV6D-21A0A0A0MT36 114 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 ENDOD1O94919 500 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 RPS6KA3P51812 740 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 DNAL1Q4LDG9 190 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 FKBP1CQ5VVH2 108 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 SLC9A4Q6AI14 798 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 SPATA24Q86W54 205 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 SPATA22Q8NHS9 363 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 KCTD4Q8WVF5 259 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 APBA2Q99767 749 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 TUBB6Q9BUF5 446 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 FTHL17Q9BXU8 183 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 AS3MTQ9HBK9 375 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 SPON1Q9HCB6 807 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 GIMAP2Q9UG22 337 aa14.23□□□□□ -0.13
LPCAT3-203ENST00000535479 H3BNX3 289 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 I6L893 689 aaPredicted RBP14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 EPHX2P34913 555 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 KLF10Q13118 480 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 MXD4Q14582 209 aaPredicted RBP14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 ARHGAP17Q68EM7 881 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 OTOP3Q7RTS5 596 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 DENND6AQ8IWF6 608 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 LILRA2Q8N149 483 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 METTL25Q8N6Q8 603 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 BHLHE22Q8NFJ8 381 aaPredicted RBP14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 AFG1LQ8WV93 481 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 EXT2Q93063 718 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 MAP3K20Q9NYL2 800 aaKnown RBP14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 C9IYK1 514 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 TMX2-CTNND1H3BSU7 103 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 SOCS7O14512 581 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 TPST1O60507 370 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 PROZP22891 400 aa14.22□□□□□ -0.13
LPCAT3-203ENST00000535479 PCSK6P29122 969 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms