RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 PLK5Q496M5 336 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 HSF5Q4G112 596 aaPredicted RBP9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 ANO6Q4KMQ2 910 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 C2CD6Q53TS8 623 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 ZC3H12AQ5D1E8 599 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 CDKAL1Q5VV42 579 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 NUGGCQ68CJ6 796 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 KIAA1211LQ6NV74 962 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 MSANTD2Q6P1R3 559 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 KIAA1324Q6UXG2 1013 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 FAM183BPQ6ZVS7 135 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 ANKS1BQ7Z6G8 1248 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 PHLDB2Q86SQ0 1253 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 TMEM110Q86TL2 294 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 CACUL1Q86Y37 369 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 CCDC117Q8IWD4 279 aaPredicted RBP9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 DEFB106AQ8N104 65 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 CFAP52Q8N1V2 620 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 CPXM2Q8N436 756 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 CARNMT1Q8N4J0 409 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 IPO4Q8TEX9 1081 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 CYB5D2Q8WUJ1 264 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 UCMAQ8WVF2 138 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 SPACA7Q96KW9 195 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 FCRL2Q96LA5 508 aaPredicted RBP9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 NAT10Q9H0A0 1025 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 POPDC2Q9HBU9 364 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 SEMA4GQ9NTN9 838 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 ABCB8Q9NUT2 735 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 EBF1Q9UH73 591 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 HCN2Q9UL51 889 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 STON1Q9Y6Q2 735 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 TYW5A2RUC4 315 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 MAN1A2O60476 641 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 SYNCRIPO60506 623 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 THBS1P07996 1170 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 MMEP08473 750 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 CYP11B1P15538 503 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 GABRG2P18507 467 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 HOXD9P28356 352 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 ARSDP51689 593 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 SNX16P57768 344 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 RPS24P62847 133 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 CDK17Q00537 523 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 STARD3Q14849 445 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 SF3A2Q15428 464 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 SYCP1Q15431 976 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 HIF1AQ16665 826 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 AASDHQ4L235 1098 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 FNDC3BQ53EP0 1204 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 EFHC1Q5JVL4 640 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 RAP1GAP2Q684P5 730 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 NADSYN1Q6IA69 706 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 CHST9Q7L1S5 443 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 NOP9Q86U38 636 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 CHSY1Q86X52 802 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 ERICH1Q86X53 443 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 MFN1Q8IWA4 741 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 TMEFF1Q8IYR6 380 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 LGI2Q8N0V4 545 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 GPR161Q8N6U8 529 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 ZNF366Q8N895 744 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 C12orf50Q8NA57 414 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 TMEM35BQ8NCS4 154 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 NEK11Q8NG66 645 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 SLC20A1Q8WUM9 679 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 CPA5Q8WXQ8 436 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 ALKBH8Q96BT7 664 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 RMDN1Q96DB5 314 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 SPAG5Q96R06 1193 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 DDX50Q9BQ39 737 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 TRIM62Q9BVG3 475 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 STK33Q9BYT3 514 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 NUCKS1Q9H1E3 243 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 DUSP15Q9H1R2 295 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 LHX5Q9H2C1 402 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 SEPT11Q9NVA2 429 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 DDIT4Q9NX09 232 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 ELOVL2Q9NXB9 296 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 SLC12A6Q9UHW9 1150 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 XPO7Q9UIA9 1087 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 FOXD3Q9UJU5 478 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 CYP8B1Q9UNU6 501 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 TLR6Q9Y2C9 796 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 STARD13Q9Y3M8 1113 aa9.26□□□□□ -0.93
CCDC90B-219ENST00000534753 A0A1W2PQF6 199 aa9.25□□□□□ -0.93
CCDC90B-219ENST00000534753 F8VZ95 297 aa9.25□□□□□ -0.93
CCDC90B-219ENST00000534753 H0Y626 953 aa9.25□□□□□ -0.93
CCDC90B-219ENST00000534753 EPHB6O15197 1021 aa9.25□□□□□ -0.93
CCDC90B-219ENST00000534753 HSF2BPO75031 334 aa9.25□□□□□ -0.93
CCDC90B-219ENST00000534753 IGLV3-27P01718 113 aa9.25□□□□□ -0.93
CCDC90B-219ENST00000534753 EPHX1P07099 455 aa9.25□□□□□ -0.93
CCDC90B-219ENST00000534753 ATP1A3P13637 1013 aa9.25□□□□□ -0.93
CCDC90B-219ENST00000534753 HLA-EP13747 358 aa9.25□□□□□ -0.93
CCDC90B-219ENST00000534753 ABCB4P21439 1286 aa9.25□□□□□ -0.93
CCDC90B-219ENST00000534753 CD70P32970 193 aa9.25□□□□□ -0.93
CCDC90B-219ENST00000534753 MPLP40238 635 aa9.25□□□□□ -0.93
CCDC90B-219ENST00000534753 IL12RB1P42701 662 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms