RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 SLC8B1Q6J4K2 584 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 NOTUMQ6P988 496 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 B3GNT9Q6UX72 402 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 C6orf15Q6UXA7 325 aaPredicted RBP3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 LPCAT2Q7L5N7 544 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 SYT13Q7L8C5 426 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 DNAJB7Q7Z6W7 309 aaPredicted RBP3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 ZNF227Q86WZ6 799 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 MICU3Q86XE3 530 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 SYT12Q8IV01 421 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 STPG3Q8N7X2 389 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 FAM169BQ8N8A8 192 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 ATAD1Q8NBU5 361 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 STKLD1Q8NE28 680 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 MDGA1Q8NFP4 955 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 NCOA7Q8NI08 942 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 OLIG1Q8TAK6 271 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 BPIFB1Q8TDL5 484 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 SETD7Q8WTS6 366 aaKnown RBP3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 PSPC1Q8WXF1 523 aaKnown RBP3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 RSPH1Q8WYR4 309 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 EXTL1Q92935 676 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 USP13Q92995 863 aaPredicted RBP3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 C18orf25Q96B23 403 aaPredicted RBP3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 CYP2S1Q96SQ9 504 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 MAP3K14Q99558 947 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 P2RY13Q9BPV8 354 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 JAM3Q9BX67 310 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 TEKT3Q9BXF9 490 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 CHMP4BQ9H444 224 aaKnown RBP3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 DHX33Q9H6R0 707 aaKnown RBP3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 SLC6A20Q9NP91 592 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 ASAH2Q9NR71 780 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 BARHL2Q9NY43 387 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 EVLQ9UI08 416 aaPredicted RBP3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 PILRBQ9UKJ0 227 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 MIA3Q5JRA6 1907 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 CABIN1Q9Y6J0 2220 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 ITPR3Q14573 2671 aa3.24□□□□□ -1.89
CHMP4A-208ENST00000534106 CREBBPQ92793 2442 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 CENPEQ02224 2701 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 MYH7P12883 1935 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 ATG2BQ96BY7 2078 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 GOLGA4Q13439 2230 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 SMIM28A0A1B0GU29 152 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 SGK1O00141 431 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 PODXLO00592 558 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 GJB3O75712 270 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 KLHL18O94889 574 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 SCG5P05408 212 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 SERPINF2P08697 491 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 ACO1P21399 889 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 GABRR2P28476 465 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 AXLP30530 894 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 CSF2RBP32927 897 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 FBN2P35556 2912 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 ARL2P36404 184 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 P2RY2P41231 377 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 WASP42768 502 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 GPR15P49685 360 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 NT5C2P49902 561 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 JAK3P52333 1124 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 RRADP55042 308 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 OSTNP61366 133 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 PSMC5P62195 406 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 CXADRP78310 365 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 BNC1Q01954 994 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 CCDC173Q0VFZ6 552 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 ELAVL2Q12926 359 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 USP10Q14694 798 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 SART3Q15020 963 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 DUOXA1Q1HG43 343 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 ZC2HC1CQ53FD0 456 aaPredicted RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 TAF1BQ53T94 588 aaPredicted RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 DOPEY1Q5JWR5 2465 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 LYSMD4Q5XG99 296 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 SLC27A1Q6PCB7 646 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 CASC1Q6TDU7 716 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 ANKS3Q6ZW76 656 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 HAUS6Q7Z4H7 955 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 TMEM150AQ86TG1 271 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 SGMS1Q86VZ5 419 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 RASSF3Q86WH2 238 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 SLC41A1Q8IVJ1 513 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 NAXDQ8IW45 347 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 RBM12BQ8IXT5 1001 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 ELMOD1Q8N336 334 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 ALLCQ8N6M5 410 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 MAB21L3Q8N8X9 362 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 DTX3Q8N9I9 347 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 TMEM145Q8NBT3 493 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 SPATA18Q8TC71 538 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 LRRC15Q8TF66 581 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 HMGB4Q8WW32 186 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 NEU4Q8WWR8 484 aaPredicted RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 E2F7Q96AV8 911 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 ZNF503Q96F45 646 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 NAF1Q96HR8 494 aaKnown RBP3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 AJUBAQ96IF1 538 aa3.23□□□□□ -1.89
CHMP4A-208ENST00000534106 DYDC2Q96IM9 177 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms