RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 HAPLN3Q96S86 360 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 GAS2L1Q99501 681 aaPredicted RBP19.05■□□□□ 0.64
SMPD1-208ENST00000533123 ZNF670Q9BS34 389 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 CWC15Q9P013 229 aaKnown RBP19.05■□□□□ 0.64
SMPD1-208ENST00000533123 MAP3K6O95382 1288 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 CHKAP35790 457 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 TFDP2Q14188 446 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 CTC1Q2NKJ3 1217 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 FAM182AQ5T1J6 154 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 IZUMO3Q5VZ72 239 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 NUGGCQ68CJ6 796 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 ZC3H18Q86VM9 953 aaKnown RBP19.05■□□□□ 0.64
SMPD1-208ENST00000533123 CCDC25Q86WR0 208 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 ZSWIM3Q96MP5 696 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 PWWP2AQ96N64 755 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 RUFY1Q96T51 708 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 SH3GL2Q99962 352 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 TASP1Q9H6P5 420 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 SLC12A6Q9UHW9 1150 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 HS3ST4Q9Y661 456 aa19.05■□□□□ 0.64
SMPD1-208ENST00000533123 APOL1O14791 398 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 SCAMP3O14828 347 aaKnown RBP19.04■□□□□ 0.64
SMPD1-208ENST00000533123 RNF40O75150 1001 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 KLKB1P03952 638 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 HARS2P49590 506 aaKnown RBP19.04■□□□□ 0.64
SMPD1-208ENST00000533123 NRLP54845 237 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 SLC7A9P82251 487 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 NOMO1Q15155 1222 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 PIK3R6Q5UE93 754 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 Q7L0L9 218 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 DENND1CQ8IV53 801 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 UNC45BQ8IWX7 931 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 CMTM8Q8IZV2 173 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 ATP6V0D2Q8N8Y2 350 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 ADAMTS19Q8TE59 1207 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 P3H4Q92791 437 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 FAF2Q96CS3 445 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 BTN2A3PQ96KV6 586 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 EPB41L4BQ9H329 900 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 DNAJC17Q9NVM6 304 aaKnown RBP19.04■□□□□ 0.64
SMPD1-208ENST00000533123 VPS18Q9P253 973 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 ANAPC5Q9UJX4 755 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 HEY1Q9Y5J3 304 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 HOXB8P17481 243 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-208ENST00000533123 AVPR1AP37288 418 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 PMS2P54278 862 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 GPS1Q13098 491 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 SEMA3BQ13214 749 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 SLC9A4Q6AI14 798 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 LRRN4Q8WUT4 740 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 PLD4Q96BZ4 506 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 CSPG4P5Q96PW8 444 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 FRMD8P1Q9BZ68 369 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-208ENST00000533123 OSBPL2Q9H1P3 480 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 ADAM7Q9H2U9 754 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 CCL26Q9Y258 94 aa19.04■□□□□ 0.64
SMPD1-208ENST00000533123 MCF2LO15068 1137 aa19.03■□□□□ 0.64
SMPD1-208ENST00000533123 LRIG2O94898 1065 aa19.03■□□□□ 0.64
SMPD1-208ENST00000533123 RBP3P10745 1247 aa19.03■□□□□ 0.64
SMPD1-208ENST00000533123 DDX6P26196 483 aaKnown RBP eCLIP19.03■□□□□ 0.64
SMPD1-208ENST00000533123 CORO1AP31146 461 aaKnown RBP19.03■□□□□ 0.64
SMPD1-208ENST00000533123 LTBRP36941 435 aa19.03■□□□□ 0.64
SMPD1-208ENST00000533123 ARL4AP40617 200 aa19.03■□□□□ 0.64
SMPD1-208ENST00000533123 MLLT6P55198 1093 aaPredicted RBP19.03■□□□□ 0.64
SMPD1-208ENST00000533123 MS4A13Q5J8X5 152 aa19.03■□□□□ 0.64
SMPD1-208ENST00000533123 FAM71DQ8N9W8 422 aa19.03■□□□□ 0.64
SMPD1-208ENST00000533123 NFS1Q9Y697 457 aa19.03■□□□□ 0.64
SMPD1-208ENST00000533123 GOLGA6L7A0A1B0GV03 622 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 EEF2KO00418 725 aaKnown RBP19.02■□□□□ 0.64
SMPD1-208ENST00000533123 C14orf80Q86SX3 495 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 ARL8AQ96BM9 186 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 FAM129AQ9BZQ8 928 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 SEMA4AQ9H3S1 761 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 PCDH9Q9HC56 1237 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 MFHAS1Q9Y4C4 1052 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 PFKLP17858 780 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 FSHRP23945 695 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 RAP1GAP2Q684P5 730 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 NADSYN1Q6IA69 706 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 VSIG1Q86XK7 387 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 TAB3Q8N5C8 712 aaPredicted RBP19.02■□□□□ 0.64
SMPD1-208ENST00000533123 CCDC33Q8N5R6 958 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 RSAD2Q8WXG1 361 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 C1orf74Q96LT6 269 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 EPAS1Q99814 870 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 S1PR5Q9H228 398 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 LRRC4CQ9HCJ2 640 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 VANGL2Q9ULK5 521 aa19.02■□□□□ 0.64
SMPD1-208ENST00000533123 AMPD1P23109 780 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 TPI1P60174 286 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 AUHQ13825 339 aaKnown RBP19.01■□□□□ 0.63
SMPD1-208ENST00000533123 TTMPQ5BVD1 217 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 CEP85LQ5SZL2 805 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 HIBCHQ6NVY1 386 aaPredicted RBP19.01■□□□□ 0.63
SMPD1-208ENST00000533123 RFX8Q6ZV50 586 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 CCHCR1Q8TD31 782 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 CFAP97Q9P2B7 532 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 AGO1Q9UL18 857 aaKnown RBP19.01■□□□□ 0.63
SMPD1-208ENST00000533123 H3BRJ5 948 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 H7C0C1 242 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms