RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 FNDC7Q5VTL7 733 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 SLC22A25Q6T423 547 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 MTHFD1LQ6UB35 978 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 SLC39A5Q6ZMH5 540 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 Q6ZNX1 250 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 WDR53Q7Z5U6 358 aaPredicted RBP3.27□□□□□ -1.89
CD44-234ENST00000531873 SLC44A3Q8N4M1 653 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 NGEFQ8N5V2 710 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 PDILTQ8N807 584 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 C12orf76Q8N812 135 aaPredicted RBP3.27□□□□□ -1.89
CD44-234ENST00000531873 CHST13Q8NET6 341 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 RFWD2Q8NHY2 731 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 METTL6Q8TCB7 284 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 PROKR1Q8TCW9 393 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 AKAP1Q92667 903 aaKnown RBP eCLIP3.27□□□□□ -1.89
CD44-234ENST00000531873 KCNJ9Q92806 393 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 EYA3Q99504 573 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 MPHOSPH8Q99549 860 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 MACROD1Q9BQ69 325 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 HTATIP2Q9BUP3 242 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 ITPAQ9BY32 194 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 GHITMQ9H3K2 345 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 PRKRIP1Q9H875 184 aaPredicted RBP3.27□□□□□ -1.89
CD44-234ENST00000531873 USP29Q9HBJ7 922 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 SLC2A4RGQ9NR83 387 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 BEX4Q9NWD9 120 aaPredicted RBP3.27□□□□□ -1.89
CD44-234ENST00000531873 SYBUQ9NX95 663 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 ASIC5Q9NY37 505 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 TBC1D14Q9P2M4 693 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 KLQ9UEF7 1012 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 TBC1D29Q9UFV1 150 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 SARDHQ9UL12 918 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 ADAMTS5Q9UNA0 930 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 B3GNT3Q9Y2A9 372 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 ENTPD2Q9Y5L3 495 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 PIAS3Q9Y6X2 628 aa3.27□□□□□ -1.89
CD44-234ENST00000531873 GOLGA6L10A0A0M3HER8 536 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 A0A1W2PQM1 296 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 GAGE10A6NGK3 116 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 C16orf96A6NNT2 1141 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 ZNF500O60304 480 aaPredicted RBP3.26□□□□□ -1.89
CD44-234ENST00000531873 GUCY1B2O75343 617 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 SGPL1O95470 568 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 C1RP00736 705 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 URODP06132 367 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 NPSP0C0P6 89 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 EBLN1P0CF75 366 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 UBL4AP11441 157 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 LAMP2P13473 410 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 TNNT1P13805 278 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 RPS6KB1P23443 525 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 SLC8A1P32418 973 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 ICAM3P32942 547 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 HNF1BP35680 557 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 PAFAH1B1P43034 410 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 GPD2P43304 727 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 RAD52P43351 418 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 MTNR1AP48039 350 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 EEFSECP57772 596 aaKnown RBP3.26□□□□□ -1.89
CD44-234ENST00000531873 WDR5P61964 334 aaKnown RBP3.26□□□□□ -1.89
CD44-234ENST00000531873 SETQ01105 290 aaPredicted RBP3.26□□□□□ -1.89
CD44-234ENST00000531873 DMWDQ09019 674 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 RUNDC3AQ59EK9 446 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 ZNF667Q5HYK9 610 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 KAZNQ674X7 775 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 DENND2CQ68D51 928 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 NAPEPLDQ6IQ20 393 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 MTFR2Q6P444 385 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 ANKRD16Q6P6B7 361 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 TMEM88Q6PEY1 159 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 KCNV1Q6PIU1 500 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 RNF144BQ7Z419 303 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 BCDIN3DQ7Z5W3 292 aaKnown RBP3.26□□□□□ -1.89
CD44-234ENST00000531873 GALNT5Q7Z7M9 940 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 ADGRG6Q86SQ4 1221 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 DIS3L2Q8IYB7 885 aaKnown RBP3.26□□□□□ -1.89
CD44-234ENST00000531873 ADSSL1Q8N142 457 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 PLD5Q8N7P1 536 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 ENDOVQ8N8Q3 282 aaKnown RBP3.26□□□□□ -1.89
CD44-234ENST00000531873 ABHD11Q8NFV4 315 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 MAFAQ8NHW3 353 aaPredicted RBP3.26□□□□□ -1.89
CD44-234ENST00000531873 ZCCHC10Q8TBK6 192 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 C2CD4CQ8TF44 421 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 SNRNP27Q8WVK2 155 aaKnown RBP3.26□□□□□ -1.89
CD44-234ENST00000531873 LINC00476Q8WZB0 136 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 HAS1Q92839 578 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 ATP2A3Q93084 1043 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 PERPQ96FX8 193 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 GPR78Q96P69 363 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 PLEKHG4BQ96PX9 1271 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 SDF4Q9BRK5 362 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.26□□□□□ -1.89
CD44-234ENST00000531873 NSMCE4AQ9NXX6 385 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 GAR1Q9NY12 217 aaKnown RBP3.26□□□□□ -1.89
CD44-234ENST00000531873 TAS2R10Q9NYW0 307 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 CCNL1Q9UK58 526 aaPredicted RBP3.26□□□□□ -1.89
CD44-234ENST00000531873 TSC22D4Q9Y3Q8 395 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 PKP3Q9Y446 797 aa3.26□□□□□ -1.89
CD44-234ENST00000531873 SPATA31A1Q5TZJ5 1347 aa3.25□□□□□ -1.89
CD44-234ENST00000531873 SALL3Q9BXA9 1300 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms