RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 APCDD1Q8J025 514 aa17.39■□□□□ 0.37
CPSF1-207ENST00000531727 DEFB106AQ8N104 65 aa17.39■□□□□ 0.37
CPSF1-207ENST00000531727 MLKLQ8NB16 471 aa17.39■□□□□ 0.37
CPSF1-207ENST00000531727 PPP1R13BQ96KQ4 1090 aa17.39■□□□□ 0.37
CPSF1-207ENST00000531727 SLC2A13Q96QE2 648 aa17.39■□□□□ 0.37
CPSF1-207ENST00000531727 CPXM1Q96SM3 734 aa17.39■□□□□ 0.37
CPSF1-207ENST00000531727 PRMT1Q99873 361 aaKnown RBP17.39■□□□□ 0.37
CPSF1-207ENST00000531727 FAM204AQ9H8W3 233 aa17.39■□□□□ 0.37
CPSF1-207ENST00000531727 ASNSD1Q9NWL6 643 aa17.39■□□□□ 0.37
CPSF1-207ENST00000531727 FBXL12Q9NXK8 326 aa17.39■□□□□ 0.37
CPSF1-207ENST00000531727 PCDHGB2Q9Y5G2 931 aa17.39■□□□□ 0.37
CPSF1-207ENST00000531727 NUMA1Q14980 2115 aa17.39■□□□□ 0.37
CPSF1-207ENST00000531727 TMEM131Q92545 1883 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 AKAP13Q12802 2813 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 EDDM13A0A1B0GTR0 161 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 TTC34A8MYJ7 566 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 MID1O15344 667 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 HSF2BPO75031 334 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 FSBPO95073 299 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 FTH1P19P0C7X4 201 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 SLC2A3P11169 496 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 ABCB4P21439 1286 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 CD27P26842 260 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 GRIA4P48058 902 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 PTK2Q05397 1052 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 SFSWAPQ12872 951 aaKnown RBP17.38■□□□□ 0.37
CPSF1-207ENST00000531727 SLC12A1Q13621 1099 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 KIF19Q2TAC6 998 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 EFHC1Q5JVL4 640 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 TTC39BQ5VTQ0 682 aaPredicted RBP17.38■□□□□ 0.37
CPSF1-207ENST00000531727 RNF219Q5W0B1 726 aaPredicted RBP17.38■□□□□ 0.37
CPSF1-207ENST00000531727 PASD1Q8IV76 773 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 GANCQ8TET4 914 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 SETD7Q8WTS6 366 aaKnown RBP17.38■□□□□ 0.37
CPSF1-207ENST00000531727 SIX2Q9NPC8 291 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 DDIT4Q9NX09 232 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 CEP83Q9Y592 693 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 SNX11Q9Y5W9 270 aa17.38■□□□□ 0.37
CPSF1-207ENST00000531727 WDFY3Q8IZQ1 3526 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 IGHV4-34P06331 123 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 CCR1P32246 355 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 GALCP54803 685 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 TPD52L1Q16890 204 aaPredicted RBP17.37■□□□□ 0.37
CPSF1-207ENST00000531727 RABGAP1LQ5R372 815 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 KIAA0895LQ68EN5 471 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 DBX2Q6ZNG2 339 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 C11orf57Q6ZUT1 292 aaPredicted RBP17.37■□□□□ 0.37
CPSF1-207ENST00000531727 FAM183BPQ6ZVS7 135 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 MMAAQ8IVH4 418 aaKnown RBP17.37■□□□□ 0.37
CPSF1-207ENST00000531727 CCAR2Q8N163 923 aaKnown RBP17.37■□□□□ 0.37
CPSF1-207ENST00000531727 ADAMTS14Q8WXS8 1223 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 NOX5Q96PH1 765 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 ORAI3Q9BRQ5 295 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 SERGEFQ9UGK8 458 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 ADAMTS1Q9UHI8 967 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 SLCO3A1Q9UIG8 710 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 DNAJC12Q9UKB3 198 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 AJAP1Q9UKB5 411 aaPredicted RBP17.37■□□□□ 0.37
CPSF1-207ENST00000531727 APOBEC2Q9Y235 224 aaKnown RBP17.37■□□□□ 0.37
CPSF1-207ENST00000531727 ANKRD6Q9Y2G4 727 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 PLXNA2O75051 1894 aa17.37■□□□□ 0.37
CPSF1-207ENST00000531727 SYNJ2BP-COX16A0A087WUM0 186 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 A0A1B0GVM2 712 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 A0A1W2PP55 124 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 TCAF2A6NFQ2 919 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 FAM47DPA6NHR8 397 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 FLRT2O43155 660 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 ERBB2P04626 1255 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 SLC8A1P32418 973 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 SNX16P57768 344 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 MAN2A1Q16706 1144 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 OLFML1Q6UWY5 402 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 CIR1Q86X95 450 aaPredicted RBP17.36■□□□□ 0.37
CPSF1-207ENST00000531727 PNPLA1Q8N8W4 532 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 C1orf131Q8NDD1 294 aaKnown RBP17.36■□□□□ 0.37
CPSF1-207ENST00000531727 BAHD1Q8TBE0 780 aaPredicted RBP17.36■□□□□ 0.37
CPSF1-207ENST00000531727 ZCCHC14Q8WYQ9 949 aaKnown RBP17.36■□□□□ 0.37
CPSF1-207ENST00000531727 RNF34Q969K3 372 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 IGSF8Q969P0 613 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 RPL10LQ96L21 214 aaKnown RBP17.36■□□□□ 0.37
CPSF1-207ENST00000531727 FAM129BQ96TA1 746 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 OMDQ99983 421 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 NEUROG2Q9H2A3 272 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 COX16Q9P0S2 106 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 FZD4Q9ULV1 537 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 CFAP47Q6ZTR5 3102 aa17.36■□□□□ 0.37
CPSF1-207ENST00000531727 FOXN3O00409 490 aaPredicted RBP17.35■□□□□ 0.37
CPSF1-207ENST00000531727 DAB1O75553 588 aa17.35■□□□□ 0.37
CPSF1-207ENST00000531727 GRAP2O75791 330 aa17.35■□□□□ 0.37
CPSF1-207ENST00000531727 RNASEH2AO75792 299 aaKnown RBP17.35■□□□□ 0.37
CPSF1-207ENST00000531727 ADH1BP00325 375 aa17.35■□□□□ 0.37
CPSF1-207ENST00000531727 PDGFRAP16234 1089 aa17.35■□□□□ 0.37
CPSF1-207ENST00000531727 MZF1P28698 734 aaPredicted RBP17.35■□□□□ 0.37
CPSF1-207ENST00000531727 KRT9P35527 623 aa17.35■□□□□ 0.37
CPSF1-207ENST00000531727 NNMTP40261 264 aa17.35■□□□□ 0.37
CPSF1-207ENST00000531727 STK19P49842 368 aaPredicted RBP17.35■□□□□ 0.37
CPSF1-207ENST00000531727 PLK1P53350 603 aa17.35■□□□□ 0.37
CPSF1-207ENST00000531727 OXCT1P55809 520 aa17.35■□□□□ 0.37
CPSF1-207ENST00000531727 SULT2A1Q06520 285 aa17.35■□□□□ 0.37
CPSF1-207ENST00000531727 MTA1Q13330 715 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms