RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 SETD7Q8WTS6 366 aaKnown RBP21.6■■□□□ 1.05
SMPD1-204ENST00000530395 GATA6Q92908 595 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 RNF34Q969K3 372 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 BIRC7Q96CA5 298 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 CPXM1Q96SM3 734 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 TMEM121BQ9BXQ6 578 aaPredicted RBP21.6■■□□□ 1.05
SMPD1-204ENST00000530395 MTG2Q9H4K7 406 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 TM7SF3Q9NS93 570 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 DDIT4Q9NX09 232 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 KLK13Q9UKR3 277 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 MSRB2Q9Y3D2 182 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 TMEM131Q92545 1883 aa21.6■■□□□ 1.05
SMPD1-204ENST00000530395 ITIH6Q6UXX5 1313 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 EDDM13A0A1B0GTR0 161 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 CD27P26842 260 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 CCR1P32246 355 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 GRIA4P48058 902 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 CSNK1EP49674 416 aaKnown RBP21.59■■□□□ 1.05
SMPD1-204ENST00000530395 BNC1Q01954 994 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 APBA1Q02410 837 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 MTA1Q13330 715 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 TAF5Q15542 800 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 CST6Q15828 149 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 IRF2BP1Q8IU81 584 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 DEFB106AQ8N104 65 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 KNL1Q8NG31 2342 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 SLC2A13Q96QE2 648 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 SYNCQ9H7C4 482 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 IL21RQ9HBE5 538 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 TM9SF3Q9HD45 589 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 FBXL12Q9NXK8 326 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 FNDC3AQ9Y2H6 1198 aaKnown RBP21.59■■□□□ 1.05
SMPD1-204ENST00000530395 PCDHGB2Q9Y5G2 931 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 SPEGQ15772 3267 aa21.59■■□□□ 1.05
SMPD1-204ENST00000530395 SYNJ2BP-COX16A0A087WUM0 186 aa21.58■■□□□ 1.05
SMPD1-204ENST00000530395 KRT9P35527 623 aa21.58■■□□□ 1.05
SMPD1-204ENST00000530395 NNMTP40261 264 aa21.58■■□□□ 1.05
SMPD1-204ENST00000530395 CTSOP43234 321 aaPredicted RBP21.58■■□□□ 1.05
SMPD1-204ENST00000530395 OXCT1P55809 520 aa21.58■■□□□ 1.05
SMPD1-204ENST00000530395 PITX1P78337 314 aaPredicted RBP21.58■■□□□ 1.05
SMPD1-204ENST00000530395 MAN2A1Q16706 1144 aa21.58■■□□□ 1.05
SMPD1-204ENST00000530395 C11orf57Q6ZUT1 292 aaPredicted RBP21.58■■□□□ 1.05
SMPD1-204ENST00000530395 RAB44Q7Z6P3 723 aaPredicted RBP21.58■■□□□ 1.05
SMPD1-204ENST00000530395 WDTC1Q8N5D0 677 aa21.58■■□□□ 1.05
SMPD1-204ENST00000530395 COX16Q9P0S2 106 aa21.58■■□□□ 1.05
SMPD1-204ENST00000530395 DNAJC12Q9UKB3 198 aa21.58■■□□□ 1.05
SMPD1-204ENST00000530395 PCOLCE2Q9UKZ9 415 aa21.58■■□□□ 1.05
SMPD1-204ENST00000530395 ZMIZ1Q9ULJ6 1067 aa21.58■■□□□ 1.05
SMPD1-204ENST00000530395 PLXNA2O75051 1894 aa21.58■■□□□ 1.04
SMPD1-204ENST00000530395 A0A1B0GVM2 712 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 TCAF2A6NFQ2 919 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 TTC34A8MYJ7 566 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 FLRT2O43155 660 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 RNASEH2AO75792 299 aaKnown RBP21.57■■□□□ 1.04
SMPD1-204ENST00000530395 FTH1P19P0C7X4 201 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 SULT2A1Q06520 285 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 EIF4EBP2Q13542 120 aaPredicted RBP21.57■■□□□ 1.04
SMPD1-204ENST00000530395 SUZ12Q15022 739 aaKnown RBP21.57■■□□□ 1.04
SMPD1-204ENST00000530395 KIF19Q2TAC6 998 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 C9orf64Q5T6V5 341 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 KIAA0895LQ68EN5 471 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 OR6B2Q6IFH4 312 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 LRSAM1Q6UWE0 723 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 FAM183BPQ6ZVS7 135 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 ADAT2Q7Z6V5 191 aaKnown RBP21.57■■□□□ 1.04
SMPD1-204ENST00000530395 MMAAQ8IVH4 418 aaKnown RBP21.57■■□□□ 1.04
SMPD1-204ENST00000530395 CCAR2Q8N163 923 aaKnown RBP21.57■■□□□ 1.04
SMPD1-204ENST00000530395 CHCHD4Q8N4Q1 142 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 C1orf131Q8NDD1 294 aaKnown RBP21.57■■□□□ 1.04
SMPD1-204ENST00000530395 PPP1R9BQ96SB3 815 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 PRMT1Q99873 361 aaKnown RBP21.57■■□□□ 1.04
SMPD1-204ENST00000530395 OMDQ99983 421 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 CHMP5Q9NZZ3 219 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 FZD4Q9ULV1 537 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 APOBEC2Q9Y235 224 aaKnown RBP21.57■■□□□ 1.04
SMPD1-204ENST00000530395 ANKRD6Q9Y2G4 727 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 SLCO1B1Q9Y6L6 691 aa21.57■■□□□ 1.04
SMPD1-204ENST00000530395 CABIN1Q9Y6J0 2220 aa21.56■■□□□ 1.04
SMPD1-204ENST00000530395 FAM47DPA6NHR8 397 aa21.56■■□□□ 1.04
SMPD1-204ENST00000530395 LRRC72A6NJI9 287 aa21.56■■□□□ 1.04
SMPD1-204ENST00000530395 MID1O15344 667 aa21.56■■□□□ 1.04
SMPD1-204ENST00000530395 GRAP2O75791 330 aa21.56■■□□□ 1.04
SMPD1-204ENST00000530395 PDGFRAP16234 1089 aa21.56■■□□□ 1.04
SMPD1-204ENST00000530395 GLRX5Q86SX6 157 aa21.56■■□□□ 1.04
SMPD1-204ENST00000530395 APCDD1Q8J025 514 aa21.56■■□□□ 1.04
SMPD1-204ENST00000530395 ZCCHC14Q8WYQ9 949 aaKnown RBP21.56■■□□□ 1.04
SMPD1-204ENST00000530395 RPRD1AQ96P16 312 aaPredicted RBP21.56■■□□□ 1.04
SMPD1-204ENST00000530395 CLSTN2Q9H4D0 955 aa21.56■■□□□ 1.04
SMPD1-204ENST00000530395 DACH1Q9UI36 760 aa21.56■■□□□ 1.04
SMPD1-204ENST00000530395 SLCO3A1Q9UIG8 710 aa21.56■■□□□ 1.04
SMPD1-204ENST00000530395 SNX11Q9Y5W9 270 aa21.56■■□□□ 1.04
SMPD1-204ENST00000530395 A0A1W2PP55 124 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 FAM221BA6H8Z2 402 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 CBFA2T3O75081 653 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 DAB1O75553 588 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 ADH1BP00325 375 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 IGHV4-34P06331 123 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 PRKCSHP14314 528 aaPredicted RBP21.55■■□□□ 1.04
SMPD1-204ENST00000530395 SLC8A1P32418 973 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 PSMD8P48556 350 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms