RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 IL1RAPL1Q9NZN1 696 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 HES2Q9Y543 173 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 KANSL1LA0AUZ9 987 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 BUD23O43709 281 aaKnown RBP8.28□□□□□ -1.08
CTNND1-220ENST00000529526 KRT75O95678 551 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 SLURP2P0DP57 97 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TNFSF9P41273 254 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TCEA2Q15560 299 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ZNF438Q7Z4V0 828 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 SNX32Q86XE0 403 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TBCBQ99426 244 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 SH3GL1Q99961 368 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 NDEL1Q9GZM8 345 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 IGFLR1Q9H665 355 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ANKRD6Q9Y2G4 727 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 SIK3Q9Y2K2 1263 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TRPV2Q9Y5S1 764 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 LRRIQ1Q96JM4 1722 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 SNTNA6NMZ2 147 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 DCXO43602 365 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 IFNA14P01570 189 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 VEGFAP15692 232 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-220ENST00000529526 MAMLD1Q13495 774 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 BTG3Q14201 252 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-220ENST00000529526 IL17AQ16552 155 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 FAM98BQ52LJ0 330 aaKnown RBP8.28□□□□□ -1.08
CTNND1-220ENST00000529526 WSCD1Q658N2 575 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 C1orf186Q6ZWK4 172 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 HEATR4Q86WZ0 1026 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 OR52K1Q8NGK4 314 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ZBTB10Q96DT7 871 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 VCPIP1Q96JH7 1222 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 GAD1Q99259 594 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ZDHHC6Q9H6R6 413 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TAS2R13Q9NYV9 303 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 LIMD1Q9UGP4 676 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TRHDEQ9UKU6 1024 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 DUSP12Q9UNI6 340 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 KIAA1210Q9ULL0 1709 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 NFASCO94856 1347 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 HS6ST1O60243 411 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TSC22D2O75157 780 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 KRT6AP02538 564 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 KRT6BP04259 564 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TNNI3P19429 210 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 UBA1P22314 1058 aaKnown RBP8.28□□□□□ -1.08
CTNND1-220ENST00000529526 FASP25445 335 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 MMP13P45452 471 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 KRT6CP48668 564 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 GRIK3Q13003 919 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TTMPQ5BVD1 217 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ZPBP2Q6X784 338 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ZNF410Q86VK4 478 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ZCCHC9Q8N567 271 aaKnown RBP8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TMEM39AQ9NV64 488 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 FAM198AQ9UFP1 575 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 FAM50BQ9Y247 325 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 COPG1Q9Y678 874 aaKnown RBP8.28□□□□□ -1.08
CTNND1-220ENST00000529526 PDZK1P1A8MUH7 402 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TMEM114B3SHH9 223 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 MRASO14807 208 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 MAP3K13O43283 966 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 FKBP6O75344 327 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ZNF7P17097 686 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TYMPP19971 482 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 SCNN1GP51170 649 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 VGLL4Q14135 290 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ATP13A4Q4VNC1 1196 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TMPRSS6Q8IU80 811 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 OR56A4Q8NGH8 313 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 LNX1Q8TBB1 728 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ATXN2LQ8WWM7 1075 aaKnown RBP8.28□□□□□ -1.08
CTNND1-220ENST00000529526 RNF145Q96MT1 663 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 TBCDQ9BTW9 1192 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 HGH1Q9BTY7 390 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 WDR18Q9BV38 432 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ELOVL4Q9GZR5 314 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 SPG21Q9NZD8 308 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 VTI1BQ9UEU0 232 aa8.28□□□□□ -1.08
CTNND1-220ENST00000529526 ASTN1O14525 1302 aa8.27□□□□□ -1.08
CTNND1-220ENST00000529526 HACD1B0YJ81 288 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 NBNO60934 754 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 AKR1A1P14550 325 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 OAZ1P54368 228 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 PKNOX1P55347 436 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 NCF4Q15080 339 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 POM121L1PQ3SYA9 428 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 FNDC3BQ53EP0 1204 aaKnown RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 USP39Q53GS9 565 aaKnown RBP8.27□□□□□ -1.09
CTNND1-220ENST00000529526 TAF2Q6P1X5 1199 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 IL27RAQ6UWB1 636 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 KATNAL2Q8IYT4 538 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 FAM9CQ8IZT9 166 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 FBXL16Q8N461 479 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 OR6Y1Q8NGX8 325 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 METTL6Q8TCB7 284 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 APBB2Q92870 758 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 ADAM2Q99965 735 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 PORCNQ9H237 461 aa8.27□□□□□ -1.09
CTNND1-220ENST00000529526 UBA2Q9UBT2 640 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms