RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 TRIM10Q9UDY6 481 aa11.97□□□□□ -0.49
CCDC90B-210ENST00000528149 KLK13Q9UKR3 277 aa11.97□□□□□ -0.49
CCDC90B-210ENST00000528149 TLR6Q9Y2C9 796 aa11.97□□□□□ -0.49
CCDC90B-210ENST00000528149 NEUROG3Q9Y4Z2 214 aa11.97□□□□□ -0.49
CCDC90B-210ENST00000528149 PCDHGA5Q9Y5G8 931 aa11.97□□□□□ -0.49
CCDC90B-210ENST00000528149 ADGRG1Q9Y653 693 aa11.97□□□□□ -0.49
CCDC90B-210ENST00000528149 EML5Q05BV3 1969 aa11.97□□□□□ -0.49
CCDC90B-210ENST00000528149 UNC79Q9P2D8 2635 aa11.97□□□□□ -0.49
CCDC90B-210ENST00000528149 ASCC3Q8N3C0 2202 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 ASXL3Q9C0F0 2248 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 ATG2BQ96BY7 2078 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 RPP40O75818 363 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 APOEP02649 317 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 CHRM1P11229 460 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 HOXA6P31267 233 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 NUMBP49757 651 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 HDAC4P56524 1084 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 KRT83P78385 493 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 LRRC32Q14392 662 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 LY6G5CQ5SRR4 150 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 RHBDF2Q6PJF5 856 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 Q6ZNB5 142 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 BNIPLQ7Z465 357 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 RHOT2Q8IXI1 618 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 NAT16Q8N8M0 369 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 SLC35G2Q8TBE7 412 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 FNIP1Q8TF40 1166 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 RNF34Q969K3 372 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 E2F7Q96AV8 911 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 SLC39A13Q96H72 371 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 TMPRSS4Q9NRS4 437 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 PLK2Q9NYY3 685 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 XPO7Q9UIA9 1087 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 SALL4Q9UJQ4 1053 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 LSM7Q9UK45 103 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 CLEC4EQ9ULY5 219 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 DUSP10Q9Y6W6 482 aa11.96□□□□□ -0.49
CCDC90B-210ENST00000528149 GOLGA6L7A0A1B0GV03 622 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 E2F8A0AVK6 867 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 BUB1O43683 1085 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 MTA2O94776 668 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 CEACAM1P13688 526 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 TCF4P15884 667 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 GGCXP38435 758 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 NOP2P46087 812 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 PXNP49023 591 aaPredicted RBP11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 HARS2P49590 506 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 CXCR3P49682 368 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 GALK1P51570 392 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 EIF4EBP2Q13542 120 aaPredicted RBP11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 MESDQ14696 234 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 DHCR24Q15392 516 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 COL28A1Q2UY09 1125 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 NUGGCQ68CJ6 796 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 CC2D1AQ6P1N0 951 aaPredicted RBP11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 SND1Q7KZF4 910 aaKnown RBP eCLIP11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 STRADAQ7RTN6 431 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 PROSER1Q86XN7 944 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 ARFGAP1Q8N6T3 406 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 CCDC185Q8N715 623 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 CENPIQ92674 756 aaPredicted RBP11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 PGAP3Q96FM1 320 aaPredicted RBP11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 PEBP4Q96S96 227 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 GOLPH3Q9H4A6 298 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 TRPV5Q9NQA5 729 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 ANLNQ9NQW6 1124 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 AGO1Q9UL18 857 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 HCN2Q9UL51 889 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 MSRB2Q9Y3D2 182 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 SNX10Q9Y5X0 201 aa11.95□□□□□ -0.5
CCDC90B-210ENST00000528149 NUP205Q92621 2012 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 CHD5Q8TDI0 1954 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 SHROOM3Q8TF72 1996 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 TENM4Q6N022 2769 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 A0A0A6YYK5 440 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 LNP1A1A4G5 178 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 MACROD2A1Z1Q3 448 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 I6L893 689 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 MYO1FO00160 1098 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 PJA2O43164 708 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 TSPAN3O60637 253 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 ENDOD1O94919 500 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 CCDC175P0C221 793 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 DESP17661 470 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 CSRP1P21291 193 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 CCR1P32246 355 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 GJC1P36383 396 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 SEC13P55735 322 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 EMC10Q5UCC4 262 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 NADSYN1Q6IA69 706 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 SCYL2Q6P3W7 929 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 TPGS1Q6ZTW0 290 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 HTR3DQ70Z44 454 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 CHSY1Q86X52 802 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 UNC45BQ8IWX7 931 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 ADGRG2Q8IZP9 1017 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 PHTF2Q8N3S3 785 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 NIPA2Q8N8Q9 360 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 DCLK3Q9C098 648 aa11.94□□□□□ -0.5
CCDC90B-210ENST00000528149 TKTL2Q9H0I9 626 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms