RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 CDKN2BP42772 138 aa17■□□□□ 0.31
CAPN1-205ENST00000526954 MAPKAPK2P49137 400 aa17■□□□□ 0.31
CAPN1-205ENST00000526954 GNG11P61952 73 aa17■□□□□ 0.31
CAPN1-205ENST00000526954 MMRN1Q13201 1228 aa17■□□□□ 0.31
CAPN1-205ENST00000526954 SLC44A4Q53GD3 710 aa17■□□□□ 0.31
CAPN1-205ENST00000526954 ODF2Q5BJF6 829 aa17■□□□□ 0.31
CAPN1-205ENST00000526954 ANKRD20A8PQ5CZ79 823 aa17■□□□□ 0.31
CAPN1-205ENST00000526954 MFSD7Q6UXD7 560 aa17■□□□□ 0.31
CAPN1-205ENST00000526954 SPOCD1Q6ZMY3 1216 aa17■□□□□ 0.31
CAPN1-205ENST00000526954 CIR1Q86X95 450 aaPredicted RBP17■□□□□ 0.31
CAPN1-205ENST00000526954 TTC8Q8TAM2 541 aa17■□□□□ 0.31
CAPN1-205ENST00000526954 RNF25Q96BH1 459 aaPredicted RBP17■□□□□ 0.31
CAPN1-205ENST00000526954 ARHGEF4Q9NR80 690 aa17■□□□□ 0.31
CAPN1-205ENST00000526954 CLEC4EQ9ULY5 219 aa17■□□□□ 0.31
CAPN1-205ENST00000526954 NUP205Q92621 2012 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-205ENST00000526954 SPECC1L-ADORA2AF8WAN1 911 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 DCLK1O15075 740 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 DAPK3O43293 454 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 TULP3O75386 442 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 CISD3P0C7P0 127 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 ERCC2P18074 760 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 AMPD1P23109 780 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 CTHP32929 405 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 PTPN7P35236 360 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 ZNF177Q13360 481 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-205ENST00000526954 CDH18Q13634 790 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 PPP2R5EQ16537 467 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 CXorf57Q6NSI4 855 aaKnown RBP16.99■□□□□ 0.31
CAPN1-205ENST00000526954 C1orf228Q6PIY5 440 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 NYAP1Q6ZVC0 841 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 KIAA0907Q7Z7F0 614 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-205ENST00000526954 SETD3Q86TU7 594 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-205ENST00000526954 ZSCAN30Q86W11 494 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 C12orf40Q86WS4 652 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 MFN1Q8IWA4 741 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 CCDC117Q8IWD4 279 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-205ENST00000526954 CARNMT1Q8N4J0 409 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 NAT16Q8N8M0 369 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 PCDH19Q8TAB3 1148 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 WFDC5Q8TCV5 224 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 LMLNQ96KR4 655 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 RNF157Q96PX1 679 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 UHRF1Q96T88 793 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-205ENST00000526954 HEBP1Q9NRV9 189 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 MUTYHQ9UIF7 546 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 EFR3BQ9Y2G0 817 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 SLC27A6Q9Y2P4 619 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 PIAS3Q9Y6X2 628 aa16.99■□□□□ 0.31
CAPN1-205ENST00000526954 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-205ENST00000526954 H0Y626 953 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 PYGMP11217 842 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 OR1E1P30953 314 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 SLC6A11P48066 632 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 SOX9P48436 509 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 DGKGP49619 791 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 OXCT1P55809 520 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 ETF1P62495 437 aaKnown RBP16.98■□□□□ 0.31
CAPN1-205ENST00000526954 PREPLQ4J6C6 727 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-205ENST00000526954 TFDP3Q5H9I0 405 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 IER5LQ5T953 404 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 DCAF12L1Q5VU92 463 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 ZNF783Q6ZMS7 281 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 ANKS1BQ7Z6G8 1248 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 TFAP2DQ7Z6R9 452 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 SUGP1Q8IWZ8 645 aaKnown RBP16.98■□□□□ 0.31
CAPN1-205ENST00000526954 PHTF2Q8N3S3 785 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 LZTR1Q8N653 840 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 PQLC3Q8N755 202 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.98■□□□□ 0.31
CAPN1-205ENST00000526954 WDR24Q96S15 920 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 CARD9Q9H257 536 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 DNAJC17Q9NVM6 304 aaKnown RBP16.98■□□□□ 0.31
CAPN1-205ENST00000526954 KIAA1522Q9P206 1035 aaPredicted RBP16.98■□□□□ 0.31
CAPN1-205ENST00000526954 DEC1Q9P2X7 70 aa16.98■□□□□ 0.31
CAPN1-205ENST00000526954 hCG_1818297A0A087WSY0 165 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 A0A0A0MRY4 1105 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 ILVBLA1L0T0 632 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 SHISA7A6NL88 538 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 ENC1O14682 589 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 ATP1A1P05023 1023 aaKnown RBP16.97■□□□□ 0.31
CAPN1-205ENST00000526954 HLA-FP30511 346 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 CETN2P41208 172 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 PLK1P53350 603 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 PRKCQQ04759 706 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 SLC12A1Q13621 1099 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 TFDP2Q14188 446 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 PAFAH1B3Q15102 231 aaKnown RBP16.97■□□□□ 0.31
CAPN1-205ENST00000526954 MLF2Q15773 248 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-205ENST00000526954 FSCBQ5H9T9 825 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 C6orf118Q5T5N4 469 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 AFMIDQ63HM1 303 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 SLC9A4Q6AI14 798 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 ASTLQ6HA08 431 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-205ENST00000526954 GRAMD4Q6IC98 578 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 CCDC50Q8IVM0 306 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 UMODL1-AS1Q8N2C9 162 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 EXOC4Q96A65 974 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 PNKPQ96T60 521 aa16.97■□□□□ 0.31
CAPN1-205ENST00000526954 MAK16Q9BXY0 300 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms