RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 ARHGEF7Q14155 803 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 TXNRD3NBQ6F5E7 133 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 STRA8Q7Z7C7 330 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 DENND1CQ8IV53 801 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 IQCKQ8N0W5 287 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 ARMC2Q8NEN0 867 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 SCAMP5Q8TAC9 235 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 IARS2Q9NSE4 1012 aaKnown RBP9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 MPP6Q9NZW5 540 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 NR2E3Q9Y5X4 410 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 CDK5RAP2Q96SN8 1893 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 SHBGP04278 402 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 CLTBP09497 229 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 TCF4P15884 667 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 CNTFP26441 200 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 MMP13P45452 471 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 SMAD3P84022 425 aaKnown RBP9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 NAA25Q14CX7 972 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 CYP1B1Q16678 543 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 AP1ARQ63HQ0 302 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 OLFML1Q6UWY5 402 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 TAC4Q86UU9 113 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 PYROXD2Q8N2H3 581 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 ARL2BPQ9Y2Y0 163 aa9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 KIAA0100Q14667 2235 aaKnown RBP9.04□□□□□ -0.96
PPFIA1-206ENST00000526262 FANCGO15287 622 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 DIAPH2O60879 1101 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 NUDT17P0C025 328 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 PGAM1P18669 254 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 DNAJC3Q13217 504 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 SKIV2LQ15477 1246 aaKnown RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 ACBD5Q5T8D3 534 aaPredicted RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 SYPL2Q5VXT5 272 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 FBXO22Q8NEZ5 403 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 KCTD13Q8WZ19 329 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 BTN2A3PQ96KV6 586 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 ADGRE3Q9BY15 652 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 UBE2OQ9C0C9 1292 aaKnown RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 ASAH2Q9NR71 780 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 ARHGEF4Q9NR80 690 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 BCAP29Q9UHQ4 241 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 RAD54BQ9Y620 910 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 NRXN2Q9P2S2 1712 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 TRDMT1O14717 391 aaKnown RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 SCAMP3O14828 347 aaKnown RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 SH3BP5O60239 455 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 SMIM24O75264 130 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 SYF2O95926 243 aaKnown RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 RPL17P18621 184 aaKnown RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 NFKB1P19838 968 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 BMPR2Q13873 1038 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 ZRANB3Q5FWF4 1079 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 DRICH1Q6PGQ1 229 aaPredicted RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 PRSS55Q6UWB4 352 aaPredicted RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 CES3Q6UWW8 571 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 PCDH19Q8TAB3 1148 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 B3GALT6Q96L58 329 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 PPP1R10Q96QC0 940 aaKnown RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 CORO1BQ9BR76 489 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 HTATIP2Q9BUP3 242 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 RHOBTB2Q9BYZ6 727 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 POLR1EQ9GZS1 481 aaKnown RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 C11orf49Q9H6J7 331 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 UBA2Q9UBT2 640 aaPredicted RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 SEPT3Q9UH03 358 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 ZFP69BQ9UJL9 534 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 USP15Q9Y4E8 981 aaPredicted RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 MYH10P35580 1976 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 MEIS3P2A8K0S8 358 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 ALOX15BO15296 676 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 LRIG2O94898 1065 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 CRTAMO95727 393 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 PYGLP06737 847 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 GFAPP14136 432 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 L1CAMP32004 1257 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 PTGIRP43119 386 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 UPP1Q16831 310 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 HSP90AA5PQ58FG0 334 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 MAP3K21Q5TCX8 1036 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 HIBCHQ6NVY1 386 aaPredicted RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 C16orf59Q7L2K0 433 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 CTU1Q7Z7A3 348 aaKnown RBP9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 OR52K1Q8NGK4 314 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 CFAP61Q8NHU2 1237 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 MANSC1Q9H8J5 431 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 RGS18Q9NS28 235 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 ENPP3O14638 875 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 PTGESO14684 152 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 SPATA31D3P0C874 917 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 ACRP10323 421 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 HDAC4P56524 1084 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 PPIGQ13427 754 aaKnown RBP eCLIP9.03□□□□□ -0.964e-6■■□□□ 12.9
PPFIA1-206ENST00000526262 KBTBD12Q3ZCT8 623 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 TRIM60Q495X7 471 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 SPATA31D4Q6ZUB0 917 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 ACAD11Q709F0 780 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 WDTC1Q8N5D0 677 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 AGR3Q8TD06 166 aa9.03□□□□□ -0.96
PPFIA1-206ENST00000526262 E2F7Q96AV8 911 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms