RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 PDCD7Q8N8D1 485 aaKnown RBP11.05□□□□□ -0.64
SPIDR-222ENST00000524006 GBP7Q8N8V2 638 aaPredicted RBP11.05□□□□□ -0.64
SPIDR-222ENST00000524006 ATP2A3Q93084 1043 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 TTC28Q96AY4 2481 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 HDAC11Q96DB2 347 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 TMEM209Q96SK2 561 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 DHRS4Q9BTZ2 278 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 ZCWPW1Q9H0M4 648 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 GBA3Q9H227 469 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 ELAC1Q9H777 363 aaKnown RBP11.05□□□□□ -0.64
SPIDR-222ENST00000524006 KIF9Q9HAQ2 790 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 WDR6Q9NNW5 1121 aaKnown RBP11.05□□□□□ -0.64
SPIDR-222ENST00000524006 TMPRSS4Q9NRS4 437 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 OLA1Q9NTK5 396 aaKnown RBP11.05□□□□□ -0.64
SPIDR-222ENST00000524006 TMLHEQ9NVH6 421 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 BFARQ9NZS9 450 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 IGSF9Q9P2J2 1179 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 ZNF180Q9UJW8 692 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 ADAM28Q9UKQ2 775 aa11.05□□□□□ -0.64
SPIDR-222ENST00000524006 CCT8L1PA6NM43 557 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 GOLGA8RI6L899 631 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 DNM1LO00429 736 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 MOCS2O96007 188 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-222ENST00000524006 ITGB1P05556 798 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 POLBP06746 335 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 OR4Q2P0C623 313 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 IGFBP6P24592 240 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-222ENST00000524006 MGAT1P26572 445 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 RPA3P35244 121 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-222ENST00000524006 DSC1Q08554 894 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 GALNT2Q10471 571 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 PDK4Q16654 411 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 ANO4Q32M45 955 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 TTC31Q49AM3 519 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-222ENST00000524006 SPANXN3Q5MJ09 141 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
SPIDR-222ENST00000524006 FAM171A1Q5VUB5 890 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 NAPEPLDQ6IQ20 393 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 UNC5AQ6ZN44 842 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 FAM47EQ6ZV65 393 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 LINC00523Q86TU6 105 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 CAND1Q86VP6 1230 aaKnown RBP11.04□□□□□ -0.64
SPIDR-222ENST00000524006 ZNF354CQ86Y25 554 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 ZNF567Q8N184 647 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 LZTR1Q8N653 840 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 NSMCE1Q8WV22 266 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 FBXO32Q969P5 355 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 HAPLN3Q96S86 360 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 PKMYT1Q99640 499 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 OXCT2Q9BYC2 517 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-222ENST00000524006 CEP41Q9BYV8 373 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 OSBPL7Q9BZF2 842 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 OSBPL2Q9H1P3 480 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 KDM4CQ9H3R0 1056 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 LRRC40Q9H9A6 602 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 HAUS2Q9NVX0 235 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 CAPN7Q9Y6W3 813 aa11.04□□□□□ -0.64
SPIDR-222ENST00000524006 A0A1W2PPM1 405 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 A0A1W2PQH9 124 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 WDR27A2RRH5 827 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 ARHGAP42A6NI28 874 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 ANKRD65E5RJM6 399 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 KCNK1O00180 336 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 DDHD2O94830 711 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 LRIG2O94898 1065 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 OAZ2O95190 189 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 FYNP06241 537 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 PRKCHP24723 683 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 PTPN3P26045 913 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 MAGEA11P43364 429 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 PSEN1P49768 467 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 ATN1P54259 1190 aaPredicted RBP11.03□□□□□ -0.64
SPIDR-222ENST00000524006 RPL10AP62906 217 aaKnown RBP11.03□□□□□ -0.64
SPIDR-222ENST00000524006 FAAP100Q0VG06 881 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 SMARCB1Q12824 385 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 SF3A3Q12874 501 aaKnown RBP eCLIP11.03□□□□□ -0.64
SPIDR-222ENST00000524006 SEMA3BQ13214 749 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 PPP2R5DQ14738 602 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 MON1AQ86VX9 555 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 ZNF280BQ86YH2 543 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 NPAS4Q8IUM7 802 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 IGDCC3Q8IVU1 814 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 LRRC43Q8N309 656 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 ATP6V0D2Q8N8Y2 350 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 CCDC63Q8NA47 563 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 SLC43A3Q8NBI5 491 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 SCAMP5Q8TAC9 235 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 PPP1R14CQ8TAE6 165 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 TTC17Q96AE7 1141 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 ZNF669Q96BR6 464 aaPredicted RBP11.03□□□□□ -0.64
SPIDR-222ENST00000524006 C8orf48Q96LL4 319 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 AGAP3Q96P47 875 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 SEPT5Q99719 369 aaPredicted RBP11.03□□□□□ -0.64
SPIDR-222ENST00000524006 WDR83Q9BRX9 315 aaKnown RBP11.03□□□□□ -0.64
SPIDR-222ENST00000524006 MAGEB5Q9BZ81 275 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 TLR8Q9NR97 1041 aaKnown RBP11.03□□□□□ -0.64
SPIDR-222ENST00000524006 TMEM30AQ9NV96 361 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 ZFATQ9P243 1243 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 SCML2Q9UQR0 700 aa11.03□□□□□ -0.64
SPIDR-222ENST00000524006 KIAA1671Q9BY89 1806 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms