RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 GCATO75600 419 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 JTBO76095 146 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 AGR2O95994 175 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 MT-CO3P00414 261 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 CYP3A4P08684 503 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 CKMT1AP12532 417 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 APEHP13798 732 aaKnown RBP4.83□□□□□ -1.64
SKP1-210ENST00000522855 ITPKBP27987 946 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 DDIT3P35638 169 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 RCAN1P53805 252 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 CYP4F2P78329 520 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 HOXA4Q00056 320 aaPredicted RBP4.83□□□□□ -1.64
SKP1-210ENST00000522855 TBX2Q13207 712 aaPredicted RBP4.83□□□□□ -1.64
SKP1-210ENST00000522855 TRPC3Q13507 836 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 CNGA3Q16281 694 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 GLE1Q53GS7 698 aaKnown RBP4.83□□□□□ -1.64
SKP1-210ENST00000522855 AKNAD1Q5T1N1 836 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 TMEM65Q6PI78 240 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 LVRNQ6Q4G3 990 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 DCDC5Q6ZRR9 648 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 RASGRP2Q7LDG7 609 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 AKAP1Q92667 903 aaKnown RBP eCLIP4.83□□□□□ -1.64
SKP1-210ENST00000522855 PPM1MQ96MI6 270 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 TIMP4Q99727 224 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 ABHD16BQ9H3Z7 469 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 WASH6PQ9NQA3 447 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 TLK1Q9UKI8 766 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 MAFFQ9ULX9 164 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 VPS4AQ9UN37 437 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 SLC12A4Q9UP95 1085 aa4.83□□□□□ -1.64
SKP1-210ENST00000522855 SETD1BQ9UPS6 1966 aaKnown RBP4.83□□□□□ -1.64
SKP1-210ENST00000522855 REREQ9P2R6 1566 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 MLH3Q9UHC1 1453 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 SPAG9O60271 1321 aaKnown RBP4.82□□□□□ -1.64
SKP1-210ENST00000522855 SPATA31A1Q5TZJ5 1347 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 FAM90A20PA6NIJ5 464 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 M0QYT0 321 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 HOXC11O43248 304 aaPredicted RBP4.82□□□□□ -1.64
SKP1-210ENST00000522855 HEXIM1O94992 359 aaKnown RBP4.82□□□□□ -1.64
SKP1-210ENST00000522855 PYGLP06737 847 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 HNRNPCP07910 306 aaKnown RBP eCLIP4.82□□□□□ -1.64
SKP1-210ENST00000522855 CNPP09543 421 aaKnown RBP4.82□□□□□ -1.64
SKP1-210ENST00000522855 TSPY4P0CV99 314 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 TSPY10P0CW01 314 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 TNNT1P13805 278 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 GPD1P21695 349 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 CNTFP26441 200 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 NDUFS1P28331 727 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 FAM3BP58499 235 aaPredicted RBP4.82□□□□□ -1.64
SKP1-210ENST00000522855 MFSD13AQ14CX5 517 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 LARS2Q15031 903 aaKnown RBP4.82□□□□□ -1.64
SKP1-210ENST00000522855 INTS11Q5TA45 600 aaKnown RBP4.82□□□□□ -1.64
SKP1-210ENST00000522855 SERPINA13PQ6UXR4 307 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 ANKRD44Q8N8A2 993 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 PTGR2Q8N8N7 351 aaPredicted RBP4.82□□□□□ -1.64
SKP1-210ENST00000522855 SIMC1Q8NDZ2 872 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 ASB12Q8WXK4 309 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 KTI12Q96EK9 354 aaPredicted RBP4.82□□□□□ -1.64
SKP1-210ENST00000522855 TRMT61AQ96FX7 289 aaKnown RBP4.82□□□□□ -1.64
SKP1-210ENST00000522855 PRR11Q96HE9 360 aaPredicted RBP4.82□□□□□ -1.64
SKP1-210ENST00000522855 TWNKQ96RR1 684 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 HTATIP2Q9BUP3 242 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 TRIM2Q9C040 744 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 CPNE5Q9HCH3 593 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 SUFUQ9UMX1 484 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 CRYL1Q9Y2S2 319 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 WNT6Q9Y6F9 365 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 PPLO60437 1756 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 VWDEQ8N2E2 1590 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 EFCAB6Q5THR3 1501 aa4.82□□□□□ -1.64
SKP1-210ENST00000522855 H3BNC9 293 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 ZNF213O14771 459 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 MGST3O14880 152 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 FYB1O15117 783 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 MBPP02686 304 aaPredicted RBP4.81□□□□□ -1.64
SKP1-210ENST00000522855 POLBP06746 335 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 PLA2G5P39877 138 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 PNPLA4P41247 253 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 CHRNDQ07001 517 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 GOLGA8FQ08AF8 430 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 DCTN1Q14203 1278 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 RALBP1Q15311 655 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 CERKLQ49MI3 558 aaPredicted RBP4.81□□□□□ -1.64
SKP1-210ENST00000522855 CC2D1BQ5T0F9 858 aaKnown RBP4.81□□□□□ -1.64
SKP1-210ENST00000522855 SUMO4Q6EEV6 95 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 SLC39A5Q6ZMH5 540 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 SYNE3Q6ZMZ3 975 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.81□□□□□ -1.64
SKP1-210ENST00000522855 CPOQ8IVL8 374 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 SARAFQ96BY9 339 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 MAELQ96JY0 434 aaKnown RBP4.81□□□□□ -1.64
SKP1-210ENST00000522855 CCDC17Q96LX7 622 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 SEC62Q99442 399 aaKnown RBP4.81□□□□□ -1.64
SKP1-210ENST00000522855 SENP7Q9BQF6 1050 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 EIF2AK1Q9BQI3 630 aaKnown RBP4.81□□□□□ -1.64
SKP1-210ENST00000522855 ELOVL1Q9BW60 279 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 UNC45AQ9H3U1 944 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 PDE11AQ9HCR9 933 aa4.81□□□□□ -1.64
SKP1-210ENST00000522855 ALG13Q9NP73 1137 aaKnown RBP4.81□□□□□ -1.64
SKP1-210ENST00000522855 SH3BP4Q9P0V3 963 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms