RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ENGP17813 658 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 CDK11BP21127 795 aaKnown RBP17.6■□□□□ 0.41
SQLE-205ENST00000521232 SOX5P35711 763 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 PLK1P53350 603 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 RPS14P62263 151 aaKnown RBP17.6■□□□□ 0.41
SQLE-205ENST00000521232 CDR2Q01850 454 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 SYCP1Q15431 976 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 PLEKHG6Q3KR16 790 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 SLC25A52Q3SY17 297 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 C5orf22Q49AR2 442 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 WDR45BQ5MNZ6 344 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 BRMS1LQ5PSV4 323 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 ARCQ7LC44 396 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 APTXQ7Z2E3 356 aaKnown RBP17.6■□□□□ 0.41
SQLE-205ENST00000521232 APCDD1Q8J025 514 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 MSANTD4Q8NCY6 345 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 CPA5Q8WXQ8 436 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 IGSF8Q969P0 613 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 GPR174Q9BXC1 333 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 WDCPQ9H6R7 721 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 NLRC4Q9NPP4 1024 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 PIGVQ9NUD9 493 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 ARHGEF38Q9NXL2 777 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 TMEM63CQ9P1W3 806 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 ADAMTS9Q9P2N4 1935 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 PCNX2A6NKB5 2137 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 A0A1B0GVM2 712 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 TCAF2A6NFQ2 919 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 METTL12A8MUP2 240 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 PAGE1O75459 146 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 CHRNB2P17787 502 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 TFE3P19532 575 aaPredicted RBP17.59■□□□□ 0.41
SQLE-205ENST00000521232 STAT1P42224 750 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 CTSOP43234 321 aaPredicted RBP17.59■□□□□ 0.41
SQLE-205ENST00000521232 OXCT1P55809 520 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 ECT2LQ008S8 904 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 FMO1Q01740 532 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 TYRO3Q06418 890 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 HNRNPA1L2Q32P51 320 aaKnown RBP17.59■□□□□ 0.41
SQLE-205ENST00000521232 C2CD6Q53TS8 623 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 FAM102AQ5T9C2 384 aaPredicted RBP17.59■□□□□ 0.41
SQLE-205ENST00000521232 NAA35Q5VZE5 725 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 RGL4Q8IZJ4 473 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 SLC20A1Q8WUM9 679 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 RPRD1AQ96P16 312 aaPredicted RBP17.59■□□□□ 0.41
SQLE-205ENST00000521232 SPAG5Q96R06 1193 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 ERGIC2Q96RQ1 377 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 TKTL2Q9H0I9 626 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 RSPH9Q9H1X1 276 aaPredicted RBP17.59■□□□□ 0.41
SQLE-205ENST00000521232 MTG2Q9H4K7 406 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 TMEM59LQ9UK28 342 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 VANGL2Q9ULK5 521 aa17.59■□□□□ 0.41
SQLE-205ENST00000521232 TPRP12270 2363 aaKnown RBP17.58■□□□□ 0.41
SQLE-205ENST00000521232 ITIH6Q6UXX5 1313 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 TARSL2A2RTX5 802 aaKnown RBP17.58■□□□□ 0.4
SQLE-205ENST00000521232 KCNK5O95279 499 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 ADCY5O95622 1261 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 CFIP05156 583 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 MAOBP27338 520 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 SULT1E1P49888 294 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 UBXN1Q04323 297 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 GFPT1Q06210 699 aaPredicted RBP17.58■□□□□ 0.4
SQLE-205ENST00000521232 C9orf64Q5T6V5 341 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 CXorf57Q6NSI4 855 aaKnown RBP17.58■□□□□ 0.4
SQLE-205ENST00000521232 SND1Q7KZF4 910 aaKnown RBP eCLIP17.58■□□□□ 0.44e-9■■■□□ 17.8
SQLE-205ENST00000521232 BNIPLQ7Z465 357 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 C14orf80Q86SX3 495 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 CIR1Q86X95 450 aaPredicted RBP17.58■□□□□ 0.4
SQLE-205ENST00000521232 CACUL1Q86Y37 369 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 NEK11Q8NG66 645 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 C1orf74Q96LT6 269 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 PPP1R9BQ96SB3 815 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 TBCBQ99426 244 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 PCED1AQ9H1Q7 454 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 ANLNQ9NQW6 1124 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 SUSD2Q9UGT4 822 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 SLCO3A1Q9UIG8 710 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 SCML1Q9UN30 329 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 PAXBP1Q9Y5B6 917 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 PCDH15Q96QU1 1955 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 KNL1Q8NG31 2342 aa17.58■□□□□ 0.4
SQLE-205ENST00000521232 I6L893 689 aaPredicted RBP17.57■□□□□ 0.4
SQLE-205ENST00000521232 ARHGAP33O14559 1287 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 SIN3BO75182 1162 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 CLDN11O75508 207 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 DNTTP04053 509 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 GNSP15586 552 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 PDGFRAP16234 1089 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 MMP8P22894 467 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 MZF1P28698 734 aaPredicted RBP17.57■□□□□ 0.4
SQLE-205ENST00000521232 FLT3P36888 993 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 VASPP50552 380 aaPredicted RBP17.57■□□□□ 0.4
SQLE-205ENST00000521232 DEUP1Q05D60 604 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 SULT2A1Q06520 285 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 ACBD5Q5T8D3 534 aaPredicted RBP17.57■□□□□ 0.4
SQLE-205ENST00000521232 DCAF12L1Q5VU92 463 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 ZNF776Q68DI1 518 aaPredicted RBP17.57■□□□□ 0.4
SQLE-205ENST00000521232 TRNP1Q6NT89 227 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 FAM124AQ86V42 546 aa17.57■□□□□ 0.4
SQLE-205ENST00000521232 ALG14Q96F25 216 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms