RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 SLC6A3Q01959 620 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 MTA1Q13330 715 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 EIF4EBP2Q13542 120 aaPredicted RBP16.34■□□□□ 0.21
CLN8-205ENST00000520991 HNRNPDQ14103 355 aaKnown RBP16.34■□□□□ 0.21
CLN8-205ENST00000520991 KCNJ12Q14500 433 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 ARID5BQ14865 1188 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 PTPN20Q4JDL3 420 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 MIIPQ5JXC2 388 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 IL27RAQ6UWB1 636 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 OLFML1Q6UWY5 402 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 APCDD1Q8J025 514 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 CCAR2Q8N163 923 aaKnown RBP16.34■□□□□ 0.21
CLN8-205ENST00000520991 RPRD1AQ96P16 312 aaPredicted RBP16.34■□□□□ 0.21
CLN8-205ENST00000520991 PRMT1Q99873 361 aaKnown RBP16.34■□□□□ 0.21
CLN8-205ENST00000520991 PABPC3Q9H361 631 aaKnown RBP16.34■□□□□ 0.21
CLN8-205ENST00000520991 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.34■□□□□ 0.21
CLN8-205ENST00000520991 PCDHB9Q9Y5E1 797 aa16.34■□□□□ 0.21
CLN8-205ENST00000520991 MAP1BP46821 2468 aaKnown RBP16.34■□□□□ 0.21
CLN8-205ENST00000520991 CACNA1BQ00975 2339 aa16.33■□□□□ 0.21
CLN8-205ENST00000520991 CACNA1EQ15878 2313 aa16.33■□□□□ 0.21
CLN8-205ENST00000520991 EDDM13A0A1B0GTR0 161 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 TARSL2A2RTX5 802 aaKnown RBP16.33■□□□□ 0.2
CLN8-205ENST00000520991 FAM47DPA6NHR8 397 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 M0QYT0 321 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 SH3BP5O60239 455 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 TOP3BO95985 862 aaKnown RBP16.33■□□□□ 0.2
CLN8-205ENST00000520991 PDGFRAP16234 1089 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.2
CLN8-205ENST00000520991 NNMTP40261 264 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 MATKP42679 507 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 NUMBP49757 651 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 OXCT1P55809 520 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 SLC12A1Q13621 1099 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 DRAP1Q14919 205 aaPredicted RBP16.33■□□□□ 0.2
CLN8-205ENST00000520991 TEAD4Q15561 434 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 LRSAM1Q6UWE0 723 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 USP30Q70CQ3 517 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 SLC26A9Q7LBE3 791 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 ZDHHC17Q8IUH5 632 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 MMAAQ8IVH4 418 aaKnown RBP16.33■□□□□ 0.2
CLN8-205ENST00000520991 NAXDQ8IW45 347 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 TMEM35BQ8NCS4 154 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 RPL10LQ96L21 214 aaKnown RBP16.33■□□□□ 0.2
CLN8-205ENST00000520991 CAMK1GQ96NX5 476 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 SCNM1Q9BWG6 230 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 ADAM33Q9BZ11 813 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 GAREM1Q9H706 876 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 FBXL12Q9NXK8 326 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 WASF3Q9UPY6 502 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 FHOD1Q9Y613 1164 aa16.33■□□□□ 0.2
CLN8-205ENST00000520991 ITIH6Q6UXX5 1313 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 KMT2BQ9UMN6 2715 aaPredicted RBP16.32■□□□□ 0.2
CLN8-205ENST00000520991 A0A1B0GVT2 93 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 MID1O15344 667 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 RNASEH2AO75792 299 aaKnown RBP16.32■□□□□ 0.2
CLN8-205ENST00000520991 KRT37O76014 449 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 CYP11B1P15538 503 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 NOS2P35228 1153 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 CSNK1EP49674 416 aaKnown RBP16.32■□□□□ 0.2
CLN8-205ENST00000520991 CENPCQ03188 943 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 SULT2A1Q06520 285 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 CST6Q15828 149 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 C9orf64Q5T6V5 341 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 FBXL22Q6P050 247 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 UNQ6494/PRO21346Q6UXR6 183 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 C1orf216Q8TAB5 229 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 BIRC7Q96CA5 298 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 IL21RQ9HBE5 538 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 SAMSN1Q9NSI8 373 aaKnown RBP16.32■□□□□ 0.2
CLN8-205ENST00000520991 SLCO3A1Q9UIG8 710 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 VANGL2Q9ULK5 521 aa16.32■□□□□ 0.2
CLN8-205ENST00000520991 A0A1W2PP55 124 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 HYAL3O43820 417 aaPredicted RBP16.31■□□□□ 0.2
CLN8-205ENST00000520991 TRIM16O95361 564 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 EEF1GP26641 437 aaKnown RBP16.31■□□□□ 0.2
CLN8-205ENST00000520991 CD27P26842 260 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 MZF1P28698 734 aaPredicted RBP16.31■□□□□ 0.2
CLN8-205ENST00000520991 SLC8A1P32418 973 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 PSMD8P48556 350 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 STK19P49842 368 aaPredicted RBP16.31■□□□□ 0.2
CLN8-205ENST00000520991 RNASE9P60153 205 aaKnown RBP16.31■□□□□ 0.2
CLN8-205ENST00000520991 FAM193AP78312 1265 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 BNC1Q01954 994 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 KCNMA1Q12791 1236 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 AUHQ13825 339 aaKnown RBP16.31■□□□□ 0.2
CLN8-205ENST00000520991 NUMA1Q14980 2115 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 TRIP6Q15654 476 aaKnown RBP16.31■□□□□ 0.2
CLN8-205ENST00000520991 HLA-BQ31612 363 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 TCP11X2Q5H9J9 407 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 CT47A1Q5JQC4 288 aaPredicted RBP16.31■□□□□ 0.2
CLN8-205ENST00000520991 KLHDC7AQ5VTJ3 777 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 TAF3Q5VWG9 929 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 KIAA0895LQ68EN5 471 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 CXorf57Q6NSI4 855 aaKnown RBP16.31■□□□□ 0.2
CLN8-205ENST00000520991 ADAT2Q7Z6V5 191 aaKnown RBP16.31■□□□□ 0.2
CLN8-205ENST00000520991 STK40Q8N2I9 435 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 ZNF397Q8NF99 534 aaPredicted RBP16.31■□□□□ 0.2
CLN8-205ENST00000520991 SETD7Q8WTS6 366 aaKnown RBP16.31■□□□□ 0.2
CLN8-205ENST00000520991 PPP1R9BQ96SB3 815 aa16.31■□□□□ 0.2
CLN8-205ENST00000520991 OMDQ99983 421 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms