RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CCDC117Q8IWD4 279 aaPredicted RBP12.86□□□□□ -0.35
CSMD1-205ENST00000519623 DHX40Q8IX18 779 aaKnown RBP12.86□□□□□ -0.35
CSMD1-205ENST00000519623 DEFB106AQ8N104 65 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 MLKLQ8NB16 471 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 SNX19Q92543 992 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 PPP1R13BQ96KQ4 1090 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 PABPC3Q9H361 631 aaKnown RBP12.86□□□□□ -0.35
CSMD1-205ENST00000519623 TM9SF3Q9HD45 589 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 TM7SF3Q9NS93 570 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 ASNSD1Q9NWL6 643 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 FBXL12Q9NXK8 326 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 SERGEFQ9UGK8 458 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 AJAP1Q9UKB5 411 aaPredicted RBP12.86□□□□□ -0.35
CSMD1-205ENST00000519623 PCOLCE2Q9UKZ9 415 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 SCML1Q9UN30 329 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 PCDHB9Q9Y5E1 797 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 ITIH6Q6UXX5 1313 aa12.86□□□□□ -0.35
CSMD1-205ENST00000519623 TMEM8BA6NDV4 472 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 FOXN3O00409 490 aaPredicted RBP12.85□□□□□ -0.35
CSMD1-205ENST00000519623 FSBPO95073 299 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 MOCS3O95396 460 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 CER1O95813 267 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 IGHV4-34P06331 123 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 PLK1P53350 603 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 GALCP54803 685 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 CDK17Q00537 523 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 CST6Q15828 149 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 KCNT1Q5JUK3 1230 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 GLRX5Q86SX6 157 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 SLCO6A1Q86UG4 719 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 PASD1Q8IV76 773 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 PNPLA1Q8N8W4 532 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 ATP6V0D2Q8N8Y2 350 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 SETD7Q8WTS6 366 aaKnown RBP12.85□□□□□ -0.35
CSMD1-205ENST00000519623 ADAMTS14Q8WXS8 1223 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 PTPRN2Q92932 1015 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 RPL10LQ96L21 214 aaKnown RBP12.85□□□□□ -0.35
CSMD1-205ENST00000519623 NEUROG2Q9H2A3 272 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 ADAMTS1Q9UHI8 967 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 SLC12A6Q9UHW9 1150 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 DNAJC12Q9UKB3 198 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 NCKAP1Q9Y2A7 1128 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 ANKRD6Q9Y2G4 727 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 PCDHGB2Q9Y5G2 931 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 SNX11Q9Y5W9 270 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 SPEGQ15772 3267 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 TMEM131Q92545 1883 aa12.85□□□□□ -0.35
CSMD1-205ENST00000519623 PLXNB3Q9ULL4 1909 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 EDDM13A0A1B0GTR0 161 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 F5H5T6 163 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 KCNK3O14649 394 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 MID1O15344 667 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 RNASEH1O60930 286 aaKnown RBP12.84□□□□□ -0.35
CSMD1-205ENST00000519623 GRAP2O75791 330 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 CAPNS1P04632 268 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 FTH1P19P0C7X4 201 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 SLC2A3P11169 496 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 MZF1P28698 734 aaPredicted RBP12.84□□□□□ -0.35
CSMD1-205ENST00000519623 CCR1P32246 355 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 SLC8A1P32418 973 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 MTIF2P46199 727 aaKnown RBP12.84□□□□□ -0.35
CSMD1-205ENST00000519623 GRIA4P48058 902 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 PTK2Q05397 1052 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 SLC12A1Q13621 1099 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 KIAA0895LQ68EN5 471 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 FBXL22Q6P050 247 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 C11orf57Q6ZUT1 292 aaPredicted RBP12.84□□□□□ -0.35
CSMD1-205ENST00000519623 FAM183BPQ6ZVS7 135 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 SLC47A2Q86VL8 602 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 MMAAQ8IVH4 418 aaKnown RBP12.84□□□□□ -0.35
CSMD1-205ENST00000519623 CCAR2Q8N163 923 aaKnown RBP12.84□□□□□ -0.35
CSMD1-205ENST00000519623 BAHD1Q8TBE0 780 aaPredicted RBP12.84□□□□□ -0.35
CSMD1-205ENST00000519623 GANCQ8TET4 914 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 IGSF8Q969P0 613 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 ALG14Q96F25 216 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 EBF2Q9HAK2 575 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 DDIT4Q9NX09 232 aa12.84□□□□□ -0.35
CSMD1-205ENST00000519623 PKD1L2Q7Z442 2459 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 DMXL2Q8TDJ6 3036 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 SYNJ2BP-COX16A0A087WUM0 186 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 A0A1W2PP55 124 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 HSF2BPO75031 334 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 ERBB2P04626 1255 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 PNMA6AP0CW24 399 aaPredicted RBP12.83□□□□□ -0.36
CSMD1-205ENST00000519623 PDGFRAP16234 1089 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 ABCB4P21439 1286 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 CTSKP43235 329 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 NUMBP49757 651 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 STK19P49842 368 aaPredicted RBP12.83□□□□□ -0.36
CSMD1-205ENST00000519623 SLC6A3Q01959 620 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 SFSWAPQ12872 951 aaKnown RBP12.83□□□□□ -0.36
CSMD1-205ENST00000519623 AUHQ13825 339 aaKnown RBP12.83□□□□□ -0.36
CSMD1-205ENST00000519623 KCNJ12Q14500 433 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 TEAD4Q15561 434 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 MAN2A1Q16706 1144 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 PTPN20Q4JDL3 420 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 MIIPQ5JXC2 388 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 OR6B2Q6IFH4 312 aa12.83□□□□□ -0.36
CSMD1-205ENST00000519623 CXorf57Q6NSI4 855 aaKnown RBP12.83□□□□□ -0.36
CSMD1-205ENST00000519623 NCEH1Q6PIU2 408 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms