RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 STX16O14662 325 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 DSCR3O14972 297 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 HOXC11O43248 304 aaPredicted RBP4.97□□□□□ -1.61
SQLE-202ENST00000518604 CCNT1O60563 726 aaKnown RBP4.97□□□□□ -1.61
SQLE-202ENST00000518604 PLAUP00749 431 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 ACP5P13686 325 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 TFEBP19484 476 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 RPS6KA3P51812 740 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 SEC23BQ15437 767 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 NAA35Q5VZE5 725 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 CCDC70Q6NSX1 233 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 DHRS13Q6UX07 377 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 ZNF782Q6ZMW2 699 aaPredicted RBP4.97□□□□□ -1.61
SQLE-202ENST00000518604 SYNE3Q6ZMZ3 975 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 RHPN2Q8IUC4 686 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 PAQR4Q8N4S7 273 aaPredicted RBP4.97□□□□□ -1.61
SQLE-202ENST00000518604 SH3KBP1Q96B97 665 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 REEP2Q9BRK0 252 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 TM2D2Q9BX73 214 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 TXNRD2Q9NNW7 524 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 C11orf21Q9P2W6 132 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 SUFUQ9UMX1 484 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 DTX4Q9Y2E6 619 aa4.97□□□□□ -1.61
SQLE-202ENST00000518604 VWA3AA6NCI4 1184 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 WIPF3A6NGB9 483 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 PPP6CO00743 305 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 RBMXL2O75526 392 aaKnown RBP4.96□□□□□ -1.62
SQLE-202ENST00000518604 METTL18O95568 372 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 HLA-DQA2P01906 255 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 PYGLP06737 847 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 CSF1P09603 554 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 PKMP14618 531 aaKnown RBP4.96□□□□□ -1.62
SQLE-202ENST00000518604 XBP1P17861 261 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 PRPH2P23942 346 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 CD38P28907 300 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 HOXA7P31268 230 aaPredicted RBP4.96□□□□□ -1.62
SQLE-202ENST00000518604 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.96□□□□□ -1.62
SQLE-202ENST00000518604 GOLGA8FQ08AF8 430 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 TBL3Q12788 808 aaKnown RBP4.96□□□□□ -1.62
SQLE-202ENST00000518604 MTA1Q13330 715 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 TRPC3Q13507 836 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 ZNF268Q14587 947 aaPredicted RBP4.96□□□□□ -1.62
SQLE-202ENST00000518604 LRRC24Q50LG9 513 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 EARS2Q5JPH6 523 aaKnown RBP4.96□□□□□ -1.62
SQLE-202ENST00000518604 LIPMQ5VYY2 423 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 MIS18BP1Q6P0N0 1132 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 LVRNQ6Q4G3 990 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 KIAA1324Q6UXG2 1013 aaKnown RBP4.96□□□□□ -1.62
SQLE-202ENST00000518604 DPF1Q92782 380 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 RBM17Q96I25 401 aaKnown RBP4.96□□□□□ -1.62
SQLE-202ENST00000518604 ZNF347Q96SE7 839 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 ARHGAP39Q9C0H5 1083 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 OSBPL5Q9H0X9 879 aaPredicted RBP4.96□□□□□ -1.62
SQLE-202ENST00000518604 RMI1Q9H9A7 625 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 WASH6PQ9NQA3 447 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 THAP1Q9NVV9 213 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 TMEM160Q9NX00 188 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 ZNF69Q9UC07 566 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 KLQ9UEF7 1012 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 IPO11Q9UI26 975 aaKnown RBP4.96□□□□□ -1.62
SQLE-202ENST00000518604 PKP3Q9Y446 797 aa4.96□□□□□ -1.62
SQLE-202ENST00000518604 NPIPB13A6NJU9 1138 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 NPIPB5A8MRT5 1133 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 KCNJ18B7U540 433 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 NPIPB4C9JG80 1138 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 ANP32CO43423 234 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 PPFIA2O75334 1257 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 STAT1P42224 750 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 B4GALNT1Q00973 533 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 RUNDC3AQ59EK9 446 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 WDR45BQ5MNZ6 344 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 C10orf76Q5T2E6 689 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 VWA5B1Q5TIE3 1220 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 MDGA2Q7Z553 956 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.95□□□□□ -1.62
SQLE-202ENST00000518604 GALNT7Q86SF2 657 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 TMEM200AQ86VY9 491 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 SCN4BQ8IWT1 228 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 DNAJC10Q8IXB1 793 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 LINS1Q8NG48 757 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 MASTLQ96GX5 879 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 NAP1L4Q99733 375 aaKnown RBP4.95□□□□□ -1.62
SQLE-202ENST00000518604 TRIM31Q9BZY9 425 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 CLPBQ9H078 707 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 CD207Q9UJ71 328 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 SLC25A13Q9UJS0 675 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 ANAPC4Q9UJX5 808 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 TNFSF13BQ9Y275 285 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 GDAQ9Y2T3 454 aa4.95□□□□□ -1.62
SQLE-202ENST00000518604 ZNF335Q9H4Z2 1342 aaPredicted RBP4.95□□□□□ -1.62
SQLE-202ENST00000518604 CYP2D7A0A087X1C5 515 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 TMEM247A6NEH6 219 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 POLBP06746 335 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 CYP4B1P13584 511 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 ST6GAL1P15907 406 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 PAX3P23760 479 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 CNTFP26441 200 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 CCR5P51681 352 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 MVDP53602 400 aa4.94□□□□□ -1.62
SQLE-202ENST00000518604 YPEL5P62699 121 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms