RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 RFWD3Q6PCD5 774 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 SPATS2Q86XZ4 545 aaKnown RBP12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 SIX6OS1Q8N1H7 587 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 AADATQ8N5Z0 425 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 LINC00301Q8NCQ3 95 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 FIBINQ8TAL6 211 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 TAS1R2Q8TE23 839 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 EDEM1Q92611 657 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 TTC9Q92623 222 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 CCDC97Q96F63 343 aaPredicted RBP12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 FAXDC2Q96IV6 333 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 KDM4CQ9H3R0 1056 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 POLR1BQ9H9Y6 1135 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 UPF2Q9HAU5 1272 aaKnown RBP12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 EVA1BQ9NVM1 165 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 STIM2Q9P246 746 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 HESX1Q9UBX0 185 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 ERVW-1Q9UQF0 538 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 DOCK9Q9BZ29 2069 aa12.13□□□□□ -0.47
TMEM55A-202ENST00000518359 ITIH6Q6UXX5 1313 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 PYCARD-AS1I3L0S3 204 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 XPO1O14980 1071 aaKnown RBP12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 MAPK13O15264 365 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 POLR2DO15514 142 aaKnown RBP12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 MSI1O43347 362 aaKnown RBP12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 CALUO43852 315 aaPredicted RBP12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 CUTAO60888 179 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 IL1BP01584 269 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 ALPPL2P10696 532 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 KRT13P13646 458 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 NNMTP40261 264 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 GCLMP48507 274 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 CSRP3P50461 194 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 PPP2CBP62714 309 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 PPP2CAP67775 309 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 ADIGQ0VDE8 80 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 CUL4BQ13620 913 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 ELAVL3Q14576 367 aaKnown RBP12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 CDCP2Q5VXM1 449 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 INTS8Q75QN2 995 aaKnown RBP12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 BHLHA9Q7RTU4 235 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 PRICKLE2Q7Z3G6 844 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 CARNMT1Q8N4J0 409 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 OR4C6Q8NH72 309 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 MRGPRX3Q96LB0 322 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 ABCG4Q9H172 646 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 EXOC1Q9NV70 894 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 HEMK1Q9Y5R4 338 aaPredicted RBP12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 PTPN13Q12923 2485 aa12.12□□□□□ -0.47
TMEM55A-202ENST00000518359 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 TTC34A8MYJ7 566 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 PRAMEF26H0Y7S4 382 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 TRIM38O00635 465 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 SLC7A4O43246 635 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 OPA1O60313 960 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 ACSL4O60488 711 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 CSO75390 466 aaKnown RBP12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 GP1BAP07359 652 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 CKMT1AP12532 417 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 MZF1P28698 734 aaPredicted RBP12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 AFMP43652 599 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 DUSP3P51452 185 aaPredicted RBP12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 ECT2LQ008S8 904 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 BST2Q10589 180 aaKnown RBP12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 CUL4AQ13619 759 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 GOLGA7BQ2TAP0 167 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 SETMARQ53H47 684 aaPredicted RBP12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 FAM133BQ5BKY9 247 aaKnown RBP12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 PITRM1Q5JRX3 1037 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 C1orf220Q5T0J3 134 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 DSG4Q86SJ6 1040 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 SLC4A11Q8NBS3 891 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 NDRG1Q92597 394 aaKnown RBP12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 AZIN2Q96A70 460 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 KLHDC7BQ96G42 594 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 VCPIP1Q96JH7 1222 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 LMLNQ96KR4 655 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 KCTD10Q9H3F6 313 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 MMRN2Q9H8L6 949 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 CNGB3Q9NQW8 809 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 CISHQ9NSE2 258 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 CYTH4Q9UIA0 394 aa12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 INTS6Q9UL03 887 aaKnown RBP12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 UBR5O95071 2799 aaPredicted RBP12.11□□□□□ -0.47
TMEM55A-202ENST00000518359 GOLGA6L7A0A1B0GV03 622 aa12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 YJEFN3A6XGL0 299 aa12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 E7ENQ6 273 aa12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 FFAR2O15552 330 aa12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 RNGTTO60942 597 aaKnown RBP12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 IGLV3-27P01718 113 aa12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 TRIM49P0CI25 452 aa12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 TRIM49CP0CI26 452 aa12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 DGKAP23743 735 aa12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 RBMS1P29558 406 aaKnown RBP12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 MAT2AP31153 395 aaKnown RBP12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 SLC6A4P31645 630 aa12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 RAD23BP54727 409 aa12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 TBX4P57082 545 aa12.1□□□□□ -0.47
TMEM55A-202ENST00000518359 ENPEPQ07075 957 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms