RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 COLGALT2Q8IYK4 626 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 NUP93Q8N1F7 819 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 PDCD7Q8N8D1 485 aaKnown RBP11.05□□□□□ -0.64
SPIDR-204ENST00000517824 GBP7Q8N8V2 638 aaPredicted RBP11.05□□□□□ -0.64
SPIDR-204ENST00000517824 ATP2A3Q93084 1043 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 TTC28Q96AY4 2481 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 HDAC11Q96DB2 347 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 TMEM209Q96SK2 561 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 DHRS4Q9BTZ2 278 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 ZCWPW1Q9H0M4 648 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 GBA3Q9H227 469 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 ELAC1Q9H777 363 aaKnown RBP11.05□□□□□ -0.64
SPIDR-204ENST00000517824 KIF9Q9HAQ2 790 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 WDR6Q9NNW5 1121 aaKnown RBP11.05□□□□□ -0.64
SPIDR-204ENST00000517824 TMPRSS4Q9NRS4 437 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 OLA1Q9NTK5 396 aaKnown RBP11.05□□□□□ -0.64
SPIDR-204ENST00000517824 TMLHEQ9NVH6 421 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 BFARQ9NZS9 450 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 IGSF9Q9P2J2 1179 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 ZNF180Q9UJW8 692 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 ADAM28Q9UKQ2 775 aa11.05□□□□□ -0.64
SPIDR-204ENST00000517824 CCT8L1PA6NM43 557 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 GOLGA8RI6L899 631 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 DNM1LO00429 736 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 MOCS2O96007 188 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-204ENST00000517824 ITGB1P05556 798 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 POLBP06746 335 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 OR4Q2P0C623 313 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 IGFBP6P24592 240 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-204ENST00000517824 MGAT1P26572 445 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 RPA3P35244 121 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-204ENST00000517824 DSC1Q08554 894 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 GALNT2Q10471 571 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 PDK4Q16654 411 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 ANO4Q32M45 955 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 TTC31Q49AM3 519 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-204ENST00000517824 SPANXN3Q5MJ09 141 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
SPIDR-204ENST00000517824 FAM171A1Q5VUB5 890 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 NAPEPLDQ6IQ20 393 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 UNC5AQ6ZN44 842 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 FAM47EQ6ZV65 393 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 LINC00523Q86TU6 105 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 CAND1Q86VP6 1230 aaKnown RBP11.04□□□□□ -0.64
SPIDR-204ENST00000517824 ZNF354CQ86Y25 554 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 ZNF567Q8N184 647 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 LZTR1Q8N653 840 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 NSMCE1Q8WV22 266 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 FBXO32Q969P5 355 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 HAPLN3Q96S86 360 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 PKMYT1Q99640 499 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 OXCT2Q9BYC2 517 aaPredicted RBP11.04□□□□□ -0.64
SPIDR-204ENST00000517824 CEP41Q9BYV8 373 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 OSBPL7Q9BZF2 842 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 OSBPL2Q9H1P3 480 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 KDM4CQ9H3R0 1056 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 LRRC40Q9H9A6 602 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 HAUS2Q9NVX0 235 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 CAPN7Q9Y6W3 813 aa11.04□□□□□ -0.64
SPIDR-204ENST00000517824 A0A1W2PPM1 405 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 A0A1W2PQH9 124 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 WDR27A2RRH5 827 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 ARHGAP42A6NI28 874 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 ANKRD65E5RJM6 399 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 KCNK1O00180 336 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 DDHD2O94830 711 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 LRIG2O94898 1065 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 OAZ2O95190 189 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 FYNP06241 537 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 PRKCHP24723 683 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 PTPN3P26045 913 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 MAGEA11P43364 429 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 PSEN1P49768 467 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 ATN1P54259 1190 aaPredicted RBP11.03□□□□□ -0.64
SPIDR-204ENST00000517824 RPL10AP62906 217 aaKnown RBP11.03□□□□□ -0.64
SPIDR-204ENST00000517824 FAAP100Q0VG06 881 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 SMARCB1Q12824 385 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 SF3A3Q12874 501 aaKnown RBP eCLIP11.03□□□□□ -0.64
SPIDR-204ENST00000517824 SEMA3BQ13214 749 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 PPP2R5DQ14738 602 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 MON1AQ86VX9 555 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 ZNF280BQ86YH2 543 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 NPAS4Q8IUM7 802 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 IGDCC3Q8IVU1 814 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 LRRC43Q8N309 656 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 ATP6V0D2Q8N8Y2 350 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 CCDC63Q8NA47 563 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 SLC43A3Q8NBI5 491 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 SCAMP5Q8TAC9 235 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 PPP1R14CQ8TAE6 165 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 TTC17Q96AE7 1141 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 ZNF669Q96BR6 464 aaPredicted RBP11.03□□□□□ -0.64
SPIDR-204ENST00000517824 C8orf48Q96LL4 319 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 AGAP3Q96P47 875 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 SEPT5Q99719 369 aaPredicted RBP11.03□□□□□ -0.64
SPIDR-204ENST00000517824 WDR83Q9BRX9 315 aaKnown RBP11.03□□□□□ -0.64
SPIDR-204ENST00000517824 MAGEB5Q9BZ81 275 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 TLR8Q9NR97 1041 aaKnown RBP11.03□□□□□ -0.64
SPIDR-204ENST00000517824 TMEM30AQ9NV96 361 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 ZFATQ9P243 1243 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms