RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 TRIP12Q14669 1992 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 CHD9Q3L8U1 2897 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SCN5AQ14524 2016 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TTC26A0AVF1 554 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 RHPN2P1A8MT19 583 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 C5orf67F2Z3F1 127 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 F8W810 466 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 H0Y8X5 98 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PODXLO00592 558 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PDXKO00764 312 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PSMA7O14818 248 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PER2O15055 1255 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SART1O43290 800 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 TGFB1I1O43294 461 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SIGLEC6O43699 453 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 ULK1O75385 1050 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 UBXN7O94888 489 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 IL18RAPO95256 599 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 HSPA4LO95757 839 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TGFB1P01137 390 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 IGLV1-40P01703 118 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 NR3C1P04150 777 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SNRPB2P08579 225 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 KRT19P08727 400 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 DLATP10515 647 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 KCNE1P15382 129 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TNNI1P19237 187 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 DNAJB1P25685 340 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 RPL13P26373 211 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 ECI1P42126 302 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PRCPP42785 496 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TNNT3P45378 269 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 CLCNKBP51801 687 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SNRPFP62306 86 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 TFAMQ00059 246 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 ADAM9Q13443 819 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TUSC3Q13454 348 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TMEM132DQ14C87 1099 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SNRNP35Q16560 246 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 DPY19L1Q2PZI1 675 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PLPP4Q5VZY2 271 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 JADE1Q6IE81 842 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 DCLRE1AQ6PJP8 1040 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CRELD2Q6UXH1 353 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 ALKAL1Q6UXT8 129 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 USP53Q70EK8 1073 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TAS1R1Q7RTX1 841 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 VSIG1Q86XK7 387 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 KIF18BQ86Y91 864 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CBWD2Q8IUF1 395 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 LIX1LQ8IVB5 337 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 ELOA2Q8IYF1 753 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 CACNA2D3Q8IZS8 1091 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 VPS52Q8N1B4 723 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 SLC39A11Q8N1S5 342 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 GPD1LQ8N335 351 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 GUF1Q8N442 669 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 ATG16L2Q8NAA4 619 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 XXYLT1Q8NBI6 393 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 MSANTD4Q8NCY6 345 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 BEST2Q8NFU1 509 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 MAFAQ8NHW3 353 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 GPT2Q8TD30 523 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CACTINQ8WUQ7 758 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 BCL7CQ8WUZ0 217 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 AUTS2Q8WXX7 1259 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 N4BP2L2Q92802 583 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 GATA6Q92908 595 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 P2RX5Q93086 422 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PPP2R3CQ969Q6 453 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CCDC127Q96BQ5 260 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 MRPL38Q96DV4 380 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 EEF2KMTQ96G04 330 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 IGSF21Q96ID5 467 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 HEXIM2Q96MH2 286 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 UROC1Q96N76 676 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PPP1R10Q96QC0 940 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 FNBP1Q96RU3 617 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TCF25Q9BQ70 676 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PAAF1Q9BRP4 392 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 GPATCH1Q9BRR8 931 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 TMEM175Q9BSA9 504 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TMEM120AQ9BXJ8 343 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CEP41Q9BYV8 373 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 NUP62CLQ9H1M0 184 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 MAGEH1Q9H213 219 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CLSTN2Q9H4D0 955 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TLE6Q9H808 572 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 PDE11AQ9HCR9 933 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 TLR9Q9NR96 1032 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CHST7Q9NS84 486 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 OLA1Q9NTK5 396 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 IRAK4Q9NWZ3 460 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 DCAF16Q9NXF7 216 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CGNQ9P2M7 1197 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 TUBGCP4Q9UGJ1 667 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 CPSF3Q9UKF6 684 aaKnown RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 MAN1B1Q9UKM7 699 aa2.92□□□□□ -1.94
SKP1-204ENST00000517691 MAGED2Q9UNF1 606 aaPredicted RBP2.92□□□□□ -1.94
SKP1-204ENST00000517691 TMEM98Q9Y2Y6 226 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms