RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 IVLP07476 585 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 APRTP07741 180 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 GSTA2P09210 222 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CSH1P0DML2 217 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CSH2P0DML3 217 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SRGAP2BP0DMP2 458 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 RHOQP17081 205 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SSTR1P30872 391 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CD68P34810 354 aaPredicted RBP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PPM1AP35813 382 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 MDH1P40925 334 aaKnown RBP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ELK3P41970 407 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SLCO1A2P46721 670 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PPP3CCP48454 512 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 IRAK1P51617 712 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PPP2R2AP63151 447 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 COG7P83436 770 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 EFEMP1Q12805 493 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PPIGQ13427 754 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 BBS9Q3SYG4 887 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 C5orf22Q49AR2 442 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 DNAJC21Q5F1R6 531 aaKnown RBP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 MS4A13Q5J8X5 152 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 C10orf120Q5SQS8 335 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TMEM240Q5SV17 173 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SPOUT1Q5T280 376 aaKnown RBP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 FAXCQ5TGI0 409 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 KCTD11Q693B1 232 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 FAM117BQ6P1L5 589 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 LRRC8BQ6P9F7 803 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CYS1Q717R9 158 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 OTOP2Q7RTS6 562 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 EXOC3L1Q86VI1 746 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ANKMY2Q8IV38 441 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PALM2Q8IXS6 379 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TCEAL8Q8IYN2 117 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CYP4X1Q8N118 509 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 UMODL1-AS1Q8N2C9 162 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ARFGAP2Q8N6H7 521 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 RTL3Q8N8U3 475 aaKnown RBP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ATP6V0D2Q8N8Y2 350 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ATP11CQ8NB49 1132 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CCNYQ8ND76 341 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 FBXO36Q8NEA4 188 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PDZD8Q8NEN9 1154 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 FATE1Q969F0 183 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 AZIN2Q96A70 460 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CENPTQ96BT3 561 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TRMT2BQ96GJ1 504 aaKnown RBP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 BTN2A3PQ96KV6 586 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TEKT5Q96M29 485 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 YME1L1Q96TA2 773 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 GORASP1Q9BQQ3 440 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CAPS2Q9BXY5 557 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SLC39A8Q9C0K1 460 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 STMN4Q9H169 189 aaPredicted RBP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 RETREG1Q9H6L5 497 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ACSS3Q9H6R3 686 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 NOL6Q9H6R4 1146 aaKnown RBP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CCSER2Q9H7U1 834 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CNOT10Q9H9A5 744 aaKnown RBP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PLAC1Q9HBJ0 212 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 RXFP1Q9HBX9 757 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 XAB2Q9HCS7 855 aaKnown RBP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TMEM248Q9NWD8 314 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 BCCIPQ9P287 314 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SLC24A2Q9UI40 661 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 DNMT3LQ9UJW3 386 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TRHDEQ9UKU6 1024 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 HBS1LQ9Y450 684 aaKnown RBP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ACTL7BQ9Y614 415 aa5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PRRC2BQ5JSZ5 2229 aaKnown RBP5.57□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SLC12A8A0AV02 714 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SMIM23A6NLE4 172 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ERI2A8K979 691 aaKnown RBP5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 KCNK1O00180 336 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 MATN3O15232 486 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ZBTB24O43167 697 aaPredicted RBP5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 COCHO43405 550 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 TLR5O60602 858 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 SPAG6O75602 509 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 FAM155BO75949 473 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 FGF18O76093 207 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 AP2A1O95782 977 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PEX11BO96011 259 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 OAS1P00973 400 aaKnown RBP5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 APOEP02649 317 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 URODP06132 367 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CTSAP10619 480 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 CCNB1P14635 433 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ATP2A2P16615 1042 aaKnown RBP5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 EN2P19622 333 aaPredicted RBP5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PRKCHP24723 683 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PSMB4P28070 264 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ATP5DP30049 168 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 HPDP32754 393 aaPredicted RBP5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 PHBP35232 272 aa5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 ATP5C1P36542 298 aaKnown RBP5.56□□□□□ -1.52
SCARNA20.4-201ENST00000516969 GRIA1P42261 906 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms