RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 SPSB4Q96A44 273 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CENPTQ96BT3 561 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PABPC5Q96DU9 382 aaKnown RBP0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 C1GALT1C1Q96EU7 318 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 APIPQ96GX9 242 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SLC39A13Q96H72 371 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ZFYVE19Q96K21 471 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PPP1R13BQ96KQ4 1090 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MARK4Q96L34 752 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RIPOR3Q96MK2 946 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FYTTD1Q96QD9 318 aaKnown RBP0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MPHOSPH8Q99549 860 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ABHD14AQ9BUJ0 271 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MSTO1Q9BUK6 570 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SARGQ9BW04 601 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CDK19Q9BWU1 502 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 C1QTNF4Q9BXJ3 329 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ADGRE3Q9BY15 652 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 NUF2Q9BZD4 464 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 NPFFR1Q9GZQ6 430 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 REXO4Q9GZR2 422 aaKnown RBP0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 DDX24Q9GZR7 859 aaKnown RBP eCLIP0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 EGLN1Q9GZT9 426 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CLPBQ9H078 707 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 BRD8Q9H0E9 1235 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CDH19Q9H159 772 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SLC25A32Q9H2D1 315 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ABHD16BQ9H3Z7 469 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RETREG1Q9H6L5 497 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PLEKHA2Q9HB19 425 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PLAC1Q9HBJ0 212 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ZNF287Q9HBT7 754 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 Q9N2J8 555 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SARS2Q9NP81 518 aaKnown RBP0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 NRIP3Q9NQ35 241 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 DDX4Q9NQI0 724 aaKnown RBP0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 POT1Q9NUX5 634 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ARL8BQ9NVJ2 186 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SLC52A1Q9NWF4 448 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 DDX43Q9NXZ2 648 aaKnown RBP0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FEZ2Q9UHY8 353 aaPredicted RBP0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MCM8Q9UJA3 840 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ERRFI1Q9UJM3 462 aaPredicted RBP0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TINAGQ9UJW2 476 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RALYQ9UKM9 306 aaKnown RBP0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TPCN1Q9ULQ1 816 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PADI3Q9ULW8 664 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 DAPP1Q9UN19 280 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 DTX4Q9Y2E6 619 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ANKRD6Q9Y2G4 727 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SNX13Q9Y5W8 968 aa0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CFAP20Q9Y6A4 193 aaKnown RBP0.37□□□□□ -2.35
RNU6-1049P-201ENST00000516414 A0A1B0GU03 582 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 A0A1B0GUV1 79 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 LOC102723971A0A1B0GUV8 181 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RPS10-NUDT3A0A1W2PQS6 291 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FAM90A20PA6NIJ5 464 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FOXO6A8MYZ6 492 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SRRM5B3KS81 715 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 KCNJ18B7U540 433 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TMEM232C9JQI7 657 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 E7ENX8 843 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PROB1E7EW31 1015 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 H3BML4 177 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 STX16-NPEPL1H3BU86 382 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MYO1CO00159 1063 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 GRM8O00222 908 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 IPO5O00410 1097 aaKnown RBP0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 STX16O14662 325 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 NPC1O15118 1278 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CCP110O43303 1012 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TLX3O43711 291 aaPredicted RBP0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MARCH6O60337 910 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TLR5O60602 858 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RGS11O94810 467 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SORBS2O94875 1100 aaKnown RBP0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MOCS3O95396 460 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 NGFP01138 241 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 IGKV3-20P01619 116 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 GNAI2P04899 355 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ANXA6P08133 673 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FCGR2AP12318 317 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CPA1P15085 419 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RPS6KB1P23443 525 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MST1P26927 711 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ACVR2AP27037 513 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MARK3P27448 753 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PDIA3P30101 505 aaKnown RBP0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PPIFP30405 207 aaKnown RBP0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MAP2K2P36507 400 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 HSPA7P48741 367 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 POLD2P49005 469 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TAF6P49848 677 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CASP5P51878 434 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TPTEP56180 551 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RRP1P56182 461 aaKnown RBP0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CLDN2P57739 230 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 NLRP5P59047 1200 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TAS2R50P59544 299 aa0.36□□□□□ -2.35
RNU6-1049P-201ENST00000516414 KRTAP12-2P59991 146 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms