RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PITRM1Q5JRX3 1037 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 ACAD10Q6JQN1 1059 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 LRSAM1Q6UWE0 723 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 KIAA2013Q8IYS2 634 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 MCOLN2Q8IZK6 566 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 EMC1Q8N766 993 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 SORCS1Q8WY21 1168 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 CENPIQ92674 756 aaPredicted RBP13.18□□□□□ -0.3
CLCN3-210ENST00000515420 SELENOOQ9BVL4 669 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 RETREG1Q9H6L5 497 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 SEMA4GQ9NTN9 838 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 USP36Q9P275 1121 aaKnown RBP13.18□□□□□ -0.3
CLCN3-210ENST00000515420 SUN2Q9UH99 717 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 VANGL2Q9ULK5 521 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 TBC1D30Q9Y2I9 924 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 RAD54BQ9Y620 910 aa13.18□□□□□ -0.3
CLCN3-210ENST00000515420 BZW2Q9Y6E2 419 aaKnown RBP13.18□□□□□ -0.3
CLCN3-210ENST00000515420 NYNRINQ9P2P1 1898 aaKnown RBP13.18□□□□□ -0.3
CLCN3-210ENST00000515420 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.17□□□□□ -0.3
CLCN3-210ENST00000515420 BCLAF3A2AJT9 711 aaKnown RBP13.17□□□□□ -0.3
CLCN3-210ENST00000515420 ANKRD62A6NC57 917 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 PRR5-ARHGAP8B1AHC4 643 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 I6L893 689 aaPredicted RBP13.17□□□□□ -0.3
CLCN3-210ENST00000515420 AP5Z1O43299 807 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 IGLV3-19P01714 112 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 ZNF806P0C7X5 589 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 BCKDHBP21953 392 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 COPAP53621 1224 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 ARHGAP8P85298 464 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 ECT2LQ008S8 904 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 NRG1Q02297 640 aaPredicted RBP13.17□□□□□ -0.3
CLCN3-210ENST00000515420 KLHL30Q0D2K2 578 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 SPEM2Q0P670 501 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 ZNF177Q13360 481 aaPredicted RBP13.17□□□□□ -0.3
CLCN3-210ENST00000515420 ARL13BQ3SXY8 428 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 CCDC14Q49A88 953 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 PLA2G2CQ5R387 149 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 CXorf57Q6NSI4 855 aaKnown RBP13.17□□□□□ -0.3
CLCN3-210ENST00000515420 LRRC31Q6UY01 552 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 LPCAT2Q7L5N7 544 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 SETD3Q86TU7 594 aaPredicted RBP13.17□□□□□ -0.3
CLCN3-210ENST00000515420 ZNF683Q8IZ20 524 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 OR2T3Q8NH03 318 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 JOSD2Q8TAC2 188 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 CYB5D2Q8WUJ1 264 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 RXFP2Q8WXD0 754 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 RLN3Q8WXF3 142 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 IGSF8Q969P0 613 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 MYO19Q96H55 970 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 MKRN2Q9H000 416 aaKnown RBP13.17□□□□□ -0.3
CLCN3-210ENST00000515420 SIK2Q9H0K1 926 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 TSPY26PQ9H489 355 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 HAUS4Q9H6D7 363 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 PRDM16Q9HAZ2 1276 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 PARD6AQ9NPB6 346 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 ANLNQ9NQW6 1124 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 MBD1Q9UIS9 605 aaPredicted RBP13.17□□□□□ -0.3
CLCN3-210ENST00000515420 USP18Q9UMW8 372 aa13.17□□□□□ -0.3
CLCN3-210ENST00000515420 IGHV1OR15-9A0A0B4J2B8 117 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 DRGXA6NNA5 263 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 MAP3K13O43283 966 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 DESP17661 470 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 GPD1P21695 349 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 SDHBP21912 280 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 RFC1P35251 1148 aaPredicted RBP13.16□□□□□ -0.3
CLCN3-210ENST00000515420 HOXD12P35452 270 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 MPLP40238 635 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 ZBED6P86452 979 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 ATP11AP98196 1134 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 ZBTB16Q05516 673 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 HNRNPA1L2Q32P51 320 aaKnown RBP13.16□□□□□ -0.3
CLCN3-210ENST00000515420 PPP1R15BQ5SWA1 713 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 E4F1Q66K89 784 aaPredicted RBP13.16□□□□□ -0.3
CLCN3-210ENST00000515420 DNAJC24Q6P3W2 148 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 WDR59Q6PJI9 974 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 PRR23CQ6ZRP0 262 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 FAM131BQ86XD5 332 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 TMPRSS6Q8IU80 811 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 PRCCQ92733 491 aaPredicted RBP13.16□□□□□ -0.3
CLCN3-210ENST00000515420 NTAN1Q96AB6 310 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 SIPA1Q96FS4 1042 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 MRGPRX3Q96LB0 322 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 ARRDC1-AS1Q9H2J1 176 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 ITM2CQ9NQX7 267 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 VPS45Q9NRW7 570 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 IFNKQ9P0W0 207 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 PPARGC1AQ9UBK2 798 aaKnown RBP13.16□□□□□ -0.3
CLCN3-210ENST00000515420 CAPN11Q9UMQ6 739 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 ERVW-1Q9UQF0 538 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 INVSQ9Y283 1065 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 CHD5Q8TDI0 1954 aa13.16□□□□□ -0.3
CLCN3-210ENST00000515420 CEP250Q9BV73 2442 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 SPTBN4Q9H254 2564 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 FAM170AA1A519 330 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 TARSL2A2RTX5 802 aaKnown RBP13.15□□□□□ -0.3
CLCN3-210ENST00000515420 E9PAM4 449 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 CBFA2T2O43439 604 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 ACADMP11310 421 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 HLA-EP13747 358 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 OXTRP30559 389 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms