RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 STARD13Q9Y3M8 1113 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 MYOFQ9NZM1 2061 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 OBSL1O75147 1896 aa8.6□□□□□ -1.03
CCL28-204ENST00000514421 PTPRZ1P23471 2315 aaPredicted RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 TCRBV5S1A1TA0A578 114 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 TYW5A2RUC4 315 aaKnown RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 MIF4GDA9UHW6 222 aaKnown RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 H0Y858 1186 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 TRIM24O15164 1050 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 DDX3YO15523 660 aaKnown RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 TBL1XO60907 577 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 PAGE1O75459 146 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 RRM1P23921 792 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 SLC6A4P31645 630 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 PAFAH1B1P43034 410 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 PTPN9P43378 593 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 NOP2P46087 812 aaKnown RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 NAP1L1P55209 391 aaKnown RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 ATP11AP98196 1134 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 CSTF1Q05048 431 aaKnown RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 MESP2Q0VG99 397 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 TCF15Q12870 199 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 MAMLD1Q13495 774 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 AUHQ13825 339 aaKnown RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 E2F5Q15329 346 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 ZNF528Q3MIS6 628 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 CCDC14Q49A88 953 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 HSF5Q4G112 596 aaPredicted RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 C2orf27AQ580R0 203 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 BRMS1LQ5PSV4 323 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 PPP1R15BQ5SWA1 713 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 BEND6Q5SZJ8 279 aaPredicted RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 EMC10Q5UCC4 262 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 RAP1GAP2Q684P5 730 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 NADSYN1Q6IA69 706 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 PLEKHA7Q6IQ23 1121 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 TRNP1Q6NT89 227 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 DCUN1D2Q6PH85 259 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 Q6ZS52 159 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 STRADAQ7RTN6 431 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 PEX26Q7Z412 305 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 BNIPLQ7Z465 357 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 CCDC117Q8IWD4 279 aaPredicted RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 MAML2Q8IZL2 1156 aaPredicted RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 EMC1Q8N766 993 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 ZNF557Q8N988 423 aaPredicted RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 EIF1ADQ8N9N8 165 aaKnown RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 TERB1Q8NA31 727 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 HJURPQ8NCD3 748 aaPredicted RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 PRSS33Q8NF86 280 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 JOSD2Q8TAC2 188 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 USP33Q8TEY7 942 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 CENPIQ92674 756 aaPredicted RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 ATOH1Q92858 354 aaPredicted RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 P2RY11Q96G91 374 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 CFAP57Q96MR6 1250 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 TKTL2Q9H0I9 626 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 CARD9Q9H257 536 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 ARFGAP3Q9NP61 516 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 OSGEPQ9NPF4 335 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 PIGVQ9NUD9 493 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 ARHGEF38Q9NXL2 777 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 XPO7Q9UIA9 1087 aaKnown RBP8.59□□□□□ -1.03
CCL28-204ENST00000514421 CLEC4EQ9ULY5 219 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 SLC8A2Q9UPR5 921 aa8.59□□□□□ -1.03
CCL28-204ENST00000514421 PRRT4C9JH25 899 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 F5H5T6 163 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 MAP2K7O14733 419 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 PAPSS2O95340 614 aaPredicted RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 GJB6O95452 261 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 SP9P0CG40 484 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 DESP17661 470 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 TFE3P19532 575 aaPredicted RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 GPD1P21695 349 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 CTNNA2P26232 953 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 HOXD9P28356 352 aaPredicted RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 HOXA6P31267 233 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 CXCR5P32302 372 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 RDXP35241 583 aaKnown RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 ADRA1BP35368 520 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 TIE1P35590 1138 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 KIR2DL1P43626 348 aaPredicted RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 PEX5P50542 639 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 ZNF143P52747 638 aaPredicted RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 NRLP54845 237 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 SEC13P55735 322 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 RPL7AP62424 266 aaKnown RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 VSNL1P62760 191 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 RPS24P62847 133 aaKnown RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 SATB1Q01826 763 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 KDSRQ06136 332 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 C15orf59Q2T9L4 293 aaPredicted RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 ARL13BQ3SXY8 428 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 OTUD1Q5VV17 481 aaPredicted RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 RNF43Q68DV7 783 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 SDE2Q6IQ49 451 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 FBXL22Q6P050 247 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 TMCO3Q6UWJ1 677 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 LRRC31Q6UY01 552 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms