RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 AMHR2Q16671 573 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 KIZQ2M2Z5 673 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 ATF7IP2Q5U623 682 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 TXNRD3NBQ6F5E7 133 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 ZNF449Q6P9G9 518 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 LVRNQ6Q4G3 990 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 ZNF598Q86UK7 904 aaKnown RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 ADGRF2Q8IZF7 708 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 LILRA2Q8N149 483 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 ZFP28Q8NHY6 868 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 WNT8BQ93098 351 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 ACO2Q99798 780 aaKnown RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 CBWD1Q9BRT8 395 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 FAM105AQ9NUU6 356 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 DNAJC28Q9NX36 388 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 UTP6Q9NYH9 597 aaKnown RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 MOCS1Q9NZB8 636 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 PCDHGC3Q9UN70 934 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 RNF11Q9Y3C5 154 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 PABPN1LA6NDY0 278 aaKnown RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 GJB5O95377 273 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 CD52P31358 61 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 RCN2Q14257 317 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 MYLK3Q32MK0 819 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 SEL1L2Q5TEA6 688 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 KLHDC10Q6PID8 442 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 GLB1LQ6UWU2 654 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 ENOSF1Q7L5Y1 443 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 PASD1Q8IV76 773 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 PLPP6Q8IY26 295 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 CCDC89Q8N998 374 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 FNIP1Q8TF40 1166 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 ZNF689Q96CS4 500 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 DGCR14Q96DF8 476 aaKnown RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 VMP1Q96GC9 406 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 CFAP57Q96MR6 1250 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 SLC13A1Q9BZW2 595 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 DNAI2Q9GZS0 605 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 MANSC1Q9H8J5 431 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 APOBEC3GQ9HC16 384 aaKnown RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 MRM3Q9HC36 420 aaKnown RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 NDUFA13Q9P0J0 144 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 TUBGCP4Q9UGJ1 667 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 HBS1LQ9Y450 684 aaKnown RBP7.62□□□□□ -1.19
CLIP1-205ENST00000514271 TTC3P53804 2025 aa7.62□□□□□ -1.19
CLIP1-205ENST00000514271 C5orf67F2Z3F1 127 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 BOLA2-SMG1P6H3BVE0 249 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 FCHO1O14526 889 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 SMIM24O75264 130 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 CTSHP09668 335 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ACAT1P24752 427 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ACADVLP49748 655 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 LIG4P49917 911 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ELAVL2Q12926 359 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 GPNMBQ14956 572 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ANKRD20A4Q4UJ75 823 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 SGO2Q562F6 1265 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 XKR4Q5GH76 650 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 RTL10Q7L3V2 364 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ALYREFQ86V81 257 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 LRRC6Q86X45 466 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 WDR75Q8IWA0 830 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 TFB1MQ8WVM0 346 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 CNDP2Q96KP4 475 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 TDRD1Q9BXT4 1180 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ZCWPW1Q9H0M4 648 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ASB7Q9H672 318 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 MLXIPLQ9NP71 852 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 HSPBP1Q9NZL4 362 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ANAPC5Q9UJX4 755 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 RAB26Q9ULW5 256 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 PIN4Q9Y237 131 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 STK38LQ9Y2H1 464 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 KIAA0100Q14667 2235 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 TMEM189-UBE2V1I3L0A0 370 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 OGTO15294 1046 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 SORBS2O94875 1100 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 OR6B1O95007 311 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 SRGAP2CP0DJJ0 459 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 VCLP18206 1134 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 POU3F3P20264 500 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 IL4RP24394 825 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 STX2P32856 288 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 FXNQ16595 210 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 TWF2Q6IBS0 349 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ADAT2Q7Z6V5 191 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 SATL1Q86VE3 508 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 CAND1Q86VP6 1230 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ABI1Q8IZP0 508 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 CRIPAKQ8N1N5 446 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 CMASQ8NFW8 434 aaPredicted RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 FNDC8Q8TC99 324 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ZNF597Q96LX8 424 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 ADAM2Q99965 735 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 IER2Q9BTL4 223 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 RC3H2Q9HBD1 1191 aaKnown RBP7.61□□□□□ -1.19
CLIP1-205ENST00000514271 PTPRHQ9HD43 1115 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 HEY2Q9UBP5 337 aa7.61□□□□□ -1.19
CLIP1-205ENST00000514271 MAFFQ9ULX9 164 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms