RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 TSGA13Q96PP4 275 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 GORASP1Q9BQQ3 440 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 VN1R3Q9BXE9 311 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 GBA3Q9H227 469 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 SSU72Q9NP77 194 aaKnown RBP15.33■□□□□ 0.05
VCAN-211ENST00000513984 ATP11BQ9Y2G3 1177 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 BACE2Q9Y5Z0 518 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 CDY1Q9Y6F8 540 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 ANAPC1Q9H1A4 1944 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 WDR27A2RRH5 827 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 WASH4PA8MWX3 477 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 E9PAM4 449 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 MOCS2O96007 188 aaPredicted RBP15.33■□□□□ 0.04
VCAN-211ENST00000513984 APOEP02649 317 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 CLTBP09497 229 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 ZDHHC11BP0C7U3 371 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 MLLT6P55198 1093 aaPredicted RBP15.33■□□□□ 0.04
VCAN-211ENST00000513984 TAF10Q12962 218 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 ZBTB17Q13105 803 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 PSMD5Q16401 504 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 PIK3R6Q5UE93 754 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 STEAP4Q687X5 459 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 ITPRIPL1Q6GPH6 555 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 MPP5Q8N3R9 675 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 GSDMBQ8TAX9 411 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 SGSM3Q96HU1 749 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 CELF6Q96J87 481 aaKnown RBP15.33■□□□□ 0.04
VCAN-211ENST00000513984 SMC6Q96SB8 1091 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 TTLL2Q9BWV7 592 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 TMEM39AQ9NV64 488 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 NKIRAS1Q9NYS0 192 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 FNIP2Q9P278 1114 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 SMG5Q9UPR3 1016 aaKnown RBP15.33■□□□□ 0.04
VCAN-211ENST00000513984 CHD5Q8TDI0 1954 aa15.33■□□□□ 0.04
VCAN-211ENST00000513984 FAM47DPA6NHR8 397 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 ERI2A8K979 691 aaKnown RBP15.32■□□□□ 0.04
VCAN-211ENST00000513984 F5H423 210 aaPredicted RBP15.32■□□□□ 0.04
VCAN-211ENST00000513984 PIAS1O75925 651 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 SUN1O94901 812 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 ATF6P18850 670 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 DRD4P21917 467 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 CCNCP24863 283 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 CD68P34810 354 aaPredicted RBP15.32■□□□□ 0.04
VCAN-211ENST00000513984 TRIP4Q15650 581 aaPredicted RBP15.32■□□□□ 0.04
VCAN-211ENST00000513984 RASIP1Q5U651 963 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 AFMIDQ63HM1 303 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 CYS1Q717R9 158 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 PRPF39Q86UA1 669 aaKnown RBP15.32■□□□□ 0.04
VCAN-211ENST00000513984 RTL3Q8N8U3 475 aaKnown RBP15.32■□□□□ 0.04
VCAN-211ENST00000513984 ANKRD42Q8N9B4 389 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 STAMBPL1Q96FJ0 436 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 KIF9Q9HAQ2 790 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 PCDHA11Q9Y5I1 949 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 MAD1L1Q9Y6D9 718 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 MIA3Q5JRA6 1907 aa15.32■□□□□ 0.04
VCAN-211ENST00000513984 ABHD14A-ACY1A0A1B0GW23 586 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 A0A1W2PPM1 405 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 SDR42E2A6NKP2 422 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 EBAG9O00559 213 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 ZBTB24O43167 697 aaPredicted RBP15.31■□□□□ 0.04
VCAN-211ENST00000513984 ADAM12O43184 909 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 AP2A1O95782 977 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 IGLV3-27P01718 113 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 IFNAR2P48551 515 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 TUBP50607 506 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 EFEMP1Q12805 493 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 LRRC14Q15048 493 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 KCTD11Q693B1 232 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 C14orf80Q86SX3 495 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 CCNJLQ8IV13 435 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 ZNF683Q8IZ20 524 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 ANKLE1Q8NAG6 615 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 MGARPQ8TDB4 240 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 TOP1MTQ969P6 601 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 ZNF689Q96CS4 500 aaPredicted RBP15.31■□□□□ 0.04
VCAN-211ENST00000513984 TEKT5Q96M29 485 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 FAM107BQ9H098 131 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 RC3H2Q9HBD1 1191 aaKnown RBP15.31■□□□□ 0.04
VCAN-211ENST00000513984 RSPH14Q9UHP6 348 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 ZNF180Q9UJW8 692 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 IKBKGQ9Y6K9 419 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 IQANK1A0A1B0GTG1 560 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 FAM159BA6NKW6 160 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 SLC38A8A6NNN8 435 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 TYROBPO43914 113 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 INHBAP08476 426 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 QPCTQ16769 361 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 NUGGCQ68CJ6 796 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 SLC26A11Q86WA9 606 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 LRRC6Q86X45 466 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 KLHDC8BQ8IXV7 354 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 C4orf33Q8N1A6 199 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 ATPAF2Q8N5M1 289 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 ATP6V0D2Q8N8Y2 350 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 DENND1AQ8TEH3 1009 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 DYDC1Q8WWB3 177 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 CKAP2Q8WWK9 683 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 ARNTL2Q8WYA1 636 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 BTN2A3PQ96KV6 586 aa15.31■□□□□ 0.04
VCAN-211ENST00000513984 NAT9Q9BTE0 207 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms