RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 FAM102AQ5T9C2 384 aaPredicted RBP23.71■■□□□ 1.39
SNF8-209ENST00000510558 DCAF12L1Q5VU92 463 aa23.71■■□□□ 1.39
SNF8-209ENST00000510558 ZNF776Q68DI1 518 aaPredicted RBP23.71■■□□□ 1.39
SNF8-209ENST00000510558 XYLT1Q86Y38 959 aa23.71■■□□□ 1.39
SNF8-209ENST00000510558 ADAM33Q9BZ11 813 aa23.71■■□□□ 1.39
SNF8-209ENST00000510558 FAM207AQ9NSI2 230 aaPredicted RBP23.71■■□□□ 1.39
SNF8-209ENST00000510558 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.71■■□□□ 1.39
SNF8-209ENST00000510558 STAP1Q9ULZ2 295 aa23.71■■□□□ 1.39
SNF8-209ENST00000510558 METTL12A8MUP2 240 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 ARHGAP33O14559 1287 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 SIN3BO75182 1162 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 MBD3O95983 291 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 DNTTP04053 509 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 TFE3P19532 575 aaPredicted RBP23.7■■□□□ 1.38
SNF8-209ENST00000510558 SULT1E1P49888 294 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 COPB1P53618 953 aaKnown RBP23.7■■□□□ 1.38
SNF8-209ENST00000510558 POLR2FP61218 127 aaKnown RBP23.7■■□□□ 1.38
SNF8-209ENST00000510558 NOMO3P69849 1222 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 ECT2LQ008S8 904 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 CENPCQ03188 943 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 SLC12A1Q13621 1099 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 AUHQ13825 339 aaKnown RBP23.7■■□□□ 1.38
SNF8-209ENST00000510558 CCDC183Q5T5S1 534 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 SH3PXD2AQ5TCZ1 1133 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 IGSF8Q969P0 613 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 RPRD1AQ96P16 312 aaPredicted RBP23.7■■□□□ 1.38
SNF8-209ENST00000510558 RSPH9Q9H1X1 276 aaPredicted RBP23.7■■□□□ 1.38
SNF8-209ENST00000510558 PIGVQ9NUD9 493 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 VANGL2Q9ULK5 521 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 HS3ST4Q9Y661 456 aa23.7■■□□□ 1.38
SNF8-209ENST00000510558 ITIH6Q6UXX5 1313 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 GIPC1O14908 333 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 EPHB6O15197 1021 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 PAGE1O75459 146 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 GFPT2O94808 682 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 SYPP08247 313 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 PDGFRAP16234 1089 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 CSRP1P21291 193 aaKnown RBP23.69■■□□□ 1.38
SNF8-209ENST00000510558 ACSL1P33121 698 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 GGCXP38435 758 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 ARID5BQ14865 1188 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 TTC31Q49AM3 519 aaPredicted RBP23.69■■□□□ 1.38
SNF8-209ENST00000510558 C2CD6Q53TS8 623 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 NAA35Q5VZE5 725 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 RNF219Q5W0B1 726 aaPredicted RBP23.69■■□□□ 1.38
SNF8-209ENST00000510558 DHX40Q8IX18 779 aaKnown RBP23.69■■□□□ 1.38
SNF8-209ENST00000510558 MSANTD4Q8NCY6 345 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 ANKRD20A12PQ8NF67 263 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 SLC20A1Q8WUM9 679 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 MIR1-1HGQ9H1L0 117 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 PCED1AQ9H1Q7 454 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 NLRC4Q9NPP4 1024 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 LIMA1Q9UHB6 759 aaKnown RBP23.69■■□□□ 1.38
SNF8-209ENST00000510558 NOCTQ9UK39 431 aaKnown RBP23.69■■□□□ 1.38
SNF8-209ENST00000510558 SIK3Q9Y2K2 1263 aa23.69■■□□□ 1.38
SNF8-209ENST00000510558 A0A1B0GTW7 788 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 TTC34A8MYJ7 566 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 MZF1P28698 734 aaPredicted RBP23.68■■□□□ 1.38
SNF8-209ENST00000510558 CXCR3P49682 368 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 IRAK1P51617 712 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 OXCT1P55809 520 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 JAM2P57087 298 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 BRMS1LQ5PSV4 323 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 CXorf57Q6NSI4 855 aaKnown RBP23.68■■□□□ 1.38
SNF8-209ENST00000510558 ZNF677Q86XU0 584 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 ZCCHC9Q8N567 271 aaKnown RBP23.68■■□□□ 1.38
SNF8-209ENST00000510558 MINDY1Q8N5J2 469 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 OR2I1PQ8NGU4 316 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 CPA5Q8WXQ8 436 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 NT5C3BQ969T7 300 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 PGAP3Q96FM1 320 aaPredicted RBP23.68■■□□□ 1.38
SNF8-209ENST00000510558 RPL10LQ96L21 214 aaKnown RBP23.68■■□□□ 1.38
SNF8-209ENST00000510558 SIK2Q9H0K1 926 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 WDCPQ9H6R7 721 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 ARHGEF38Q9NXL2 777 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 SLCO3A1Q9UIG8 710 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 DAAM1Q9Y4D1 1078 aa23.68■■□□□ 1.38
SNF8-209ENST00000510558 EDDM13A0A1B0GTR0 161 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 TARSL2A2RTX5 802 aaKnown RBP23.67■■□□□ 1.38
SNF8-209ENST00000510558 LGALS16A8MUM7 142 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 GOLGA8SH3BPF8 625 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 ADCY5O95622 1261 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 F9P00740 461 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 SOX5P35711 763 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 FLT3P36888 993 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 NUMBP49757 651 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 STK19P49842 368 aaPredicted RBP23.67■■□□□ 1.38
SNF8-209ENST00000510558 PLK1P53350 603 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 DEUP1Q05D60 604 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 SYCP1Q15431 976 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 SLC25A52Q3SY17 297 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 C9orf64Q5T6V5 341 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 SND1Q7KZF4 910 aaKnown RBP eCLIP23.67■■□□□ 1.38
SNF8-209ENST00000510558 C14orf80Q86SX3 495 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 HDDC3Q8N4P3 179 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 SPAG5Q96R06 1193 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 TBCBQ99426 244 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 BTBD1Q9H0C5 482 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 TKTL2Q9H0I9 626 aa23.67■■□□□ 1.38
SNF8-209ENST00000510558 C6orf106Q9H6K1 298 aaPredicted RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms