RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 BCL2A1Q16548 175 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 PFKFB3Q16875 520 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-206ENST00000509429 LONRF2Q1L5Z9 754 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 TMEM266Q2M3C6 531 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 ARL13BQ3SXY8 428 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 SLC39A12Q504Y0 691 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 DGKKQ5KSL6 1271 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 GRTP1Q5TC63 336 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 SNX30Q5VWJ9 437 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 NCAPH2Q6IBW4 605 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 PAPD4Q6PIY7 484 aaKnown RBP4.71□□□□□ -1.66
NIPBL-206ENST00000509429 LMBR1LQ6UX01 489 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 RFX8Q6ZV50 586 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 SLC22A9Q8IVM8 553 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 CADM3Q8N126 398 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 DNAAF3Q8N9W5 541 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 FBXO18Q8NFZ0 1043 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 ETNPPLQ8TBG4 499 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 PHOSPHO1Q8TCT1 267 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 LEO1Q8WVC0 666 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-206ENST00000509429 KAT2BQ92831 832 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 TMIGD2Q96BF3 282 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 TMEM169Q96HH4 297 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 TMEM176AQ96HP8 235 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 PDLIM2Q96JY6 352 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 DACH2Q96NX9 599 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 SMC6Q96SB8 1091 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 SIKE1Q9BRV8 207 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 C9orf16Q9BUW7 83 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 NTMT1Q9BV86 223 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 PINK1Q9BXM7 581 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 VPS16Q9H269 839 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 DPH5Q9H2P9 285 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 RAD21L1Q9H4I0 556 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 THAP9Q9H5L6 903 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 TFB2MQ9H5Q4 396 aaKnown RBP4.71□□□□□ -1.66
NIPBL-206ENST00000509429 LRRC19Q9H756 370 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 MVB12BQ9H7P6 319 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 GORASP2Q9H8Y8 452 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 POLE3Q9NRF9 147 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 COX16Q9P0S2 106 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 KIF17Q9P2E2 1029 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 CGGBP1Q9UFW8 167 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-206ENST00000509429 HMGXB4Q9UGU5 601 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 FZD1Q9UP38 647 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 R3HDM2Q9Y2K5 976 aaKnown RBP4.71□□□□□ -1.66
NIPBL-206ENST00000509429 ASB3Q9Y575 518 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 TRPV2Q9Y5S1 764 aa4.71□□□□□ -1.66
NIPBL-206ENST00000509429 BZW2Q9Y6E2 419 aaKnown RBP4.71□□□□□ -1.66
NIPBL-206ENST00000509429 A0A087WV62 115 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 HEATR9A2RTY3 570 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 LCHNA4D1U4 455 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 HTR3EA5X5Y0 456 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 GPR89AB7ZAQ6 455 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 H0YIN7 160 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 IRAK2O43187 625 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ADCY3O60266 1144 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 PQBP1O60828 265 aaKnown RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 FAM20BO75063 409 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 EFCAB14O75071 495 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ERLIN2O94905 339 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 GJB6O95452 261 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 IL18BPO95998 194 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ZBED1O96006 694 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 GPR89BP0CG08 455 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ZBTB48P10074 688 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 PTPN2P17706 415 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 CFL1P23528 166 aaKnown RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ADSSP30520 456 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 HOXD13P35453 343 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 RECQLP46063 649 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ZNF81P51508 661 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 THOP1P52888 689 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ELLP55199 621 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ACTN3Q08043 901 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ASPHQ12797 758 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 COASYQ13057 564 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 PTK2BQ14289 1009 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 SQLEQ14534 574 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 DHCR24Q15392 516 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 TRADDQ15628 312 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ZRSR1Q15695 479 aaKnown RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 SMAD1Q15797 465 aaKnown RBP4.7□□□□□ -1.66
NIPBL-206ENST00000509429 C2orf76Q3KRA6 126 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 FAM47CQ5HY64 1035 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 WDR93Q6P2C0 686 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 IYDQ6PHW0 289 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 SLC30A9Q6PML9 568 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 B3GNT9Q6UX72 402 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 Q6ZRM9 215 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 FAM160B2Q86V87 743 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 PPM1KQ8N3J5 372 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ARHGEF39Q8N4T4 335 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ZNF276Q8N554 614 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 C10orf53Q8N6V4 93 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 ZNF321PQ8N8H1 164 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 OR8K1Q8NGG5 319 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 MYCBPAPQ8TBZ2 947 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 CAGE1Q8TC20 777 aa4.7□□□□□ -1.66
NIPBL-206ENST00000509429 SEPT1Q8WYJ6 367 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms