RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 CHST9Q7L1S5 443 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 TMEM25Q86YD3 366 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 FAM217AQ8IXS0 508 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 ADGRG2Q8IZP9 1017 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 RTL3Q8N8U3 475 aaKnown RBP11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 ZNF557Q8N988 423 aaPredicted RBP11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 MNS1Q8NEH6 495 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 PCDH19Q8TAB3 1148 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 RIN3Q8TB24 985 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 RSAD2Q8WXG1 361 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 LRRC3BQ96PB8 259 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 FERMT1Q9BQL6 677 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 PLA2G2FQ9BZM2 168 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 MUC3BQ9H195 1237 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 EBF3Q9H4W6 596 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 RETREG1Q9H6L5 497 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 IGSF9Q9P2J2 1179 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 CDC23Q9UJX2 597 aa11.34□□□□□ -0.59
BRCC3P1-201ENST00000508559 HELZP42694 1942 aaKnown RBP11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 IGLV3-10A0A075B6K4 115 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 ARHGAP42A6NI28 874 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 ANHXE9PGG2 379 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 H7C0C1 242 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 MCF2LO15068 1137 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 RAMP2O60895 175 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 NEBLO76041 1014 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 LUC7L3O95232 432 aaKnown RBP11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 CYP17A1P05093 508 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 TYRP14679 529 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 MX2P20592 715 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 IL4RP24394 825 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 HOXC13P31276 330 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 ETFBP38117 255 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 ATP5OP48047 213 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 SGSHP51688 502 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 AMPD2Q01433 879 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 FCHO2Q0JRZ9 810 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 RUNX3Q13761 415 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 POLD3Q15054 466 aaPredicted RBP11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 TAZQ16635 292 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 ITPRIPL2Q3MIP1 535 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 ALFQ53S48 1182 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 MPP7Q5T2T1 576 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 RASGEF1CQ8N431 466 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 NAT16Q8N8M0 369 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 CCNYQ8ND76 341 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 TTC8Q8TAM2 541 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 ACTRT1Q8TDG2 376 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 FAF2Q96CS3 445 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 CELF6Q96J87 481 aaKnown RBP11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 PRICKLE1Q96MT3 831 aaPredicted RBP11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 SPON2Q9BUD6 331 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 KCNK12Q9HB15 430 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 HOMER3Q9NSC5 361 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 ETNK2Q9NVF9 386 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 TMEM248Q9NWD8 314 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 SMARCAL1Q9NZC9 954 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 PRKAG3Q9UGI9 489 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 HPCAL4Q9UM19 191 aa11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 NUP210Q8TEM1 1887 aaPredicted RBP11.33□□□□□ -0.6
BRCC3P1-201ENST00000508559 WASH4PA8MWX3 477 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 APOC4-APOC2K7ER74 178 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 PPP1R12AO14974 1030 aaPredicted RBP11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 DCLK1O15075 740 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 FANCGO15287 622 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 APOC2P02655 101 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 ASGR2P07307 311 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 NR2C2P49116 596 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 IRAK1P51617 712 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 NDST2P52849 883 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 EIF3EP60228 445 aaKnown RBP11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 TNK2Q07912 1038 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 PDK1Q15118 436 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 C5orf22Q49AR2 442 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 PREPLQ4J6C6 727 aaPredicted RBP11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 RNF219Q5W0B1 726 aaPredicted RBP11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 NCBP2-AS2Q69YL0 99 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 SLC9A4Q6AI14 798 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 IL31Q6EBC2 164 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 DARS2Q6PI48 645 aaKnown RBP11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 RHBDF2Q6PJF5 856 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 NPNTQ6UXI9 565 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 SETD3Q86TU7 594 aaPredicted RBP11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 ADHFE1Q8IWW8 467 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 ZNF683Q8IZ20 524 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 ATPAF2Q8N5M1 289 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 PQLC3Q8N755 202 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 PLD5Q8N7P1 536 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 NSMCE1Q8WV22 266 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 EXOC4Q96A65 974 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 MYEOVQ96EZ4 313 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 ASIC4Q96FT7 647 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 FAM83CQ9BQN1 747 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 RPP25Q9BUL9 199 aaKnown RBP11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 AP1M1Q9BXS5 423 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 FRMD8P1Q9BZ68 369 aaPredicted RBP11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 ECT2Q9H8V3 914 aa11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 DNAJC17Q9NVM6 304 aaKnown RBP11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 KIAA1522Q9P206 1035 aaPredicted RBP11.32□□□□□ -0.6
BRCC3P1-201ENST00000508559 TTC7AQ9ULT0 858 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms