RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 ENO1P06733 434 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 SETSIPP0DME0 302 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 AKR1A1P14550 325 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 PKMP14618 531 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 MATN1P21941 496 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 SLC5A2P31639 672 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 TRAPPC10P48553 1259 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 COMPP49747 757 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 ROR2Q01974 943 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 GAD2Q05329 585 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 DMWDQ09019 674 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 SEMA3BQ13214 749 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 P3H1Q32P28 736 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 LIPMQ5VYY2 423 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 ABLIM2Q6H8Q1 611 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 ZNF354CQ86Y25 554 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 TXLNBQ8N3L3 684 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 PRR26Q8N8Z3 221 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 MYRIPQ8NFW9 859 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 OVCA2Q8WZ82 227 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 CENPIQ92674 756 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 TBCBQ99426 244 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 TM6SF1Q9BZW5 370 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 ERVK-5Q9HDB9 667 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 STARD7Q9NQZ5 370 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 MYO1AQ9UBC5 1043 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 LDB3O75112 727 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 IGHMBP2P38935 993 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 CASP5P51878 434 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 CRYZQ08257 329 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 SHBQ15464 509 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 IZUMO4Q1ZYL8 232 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 GLE1Q53GS7 698 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 OTUD3Q5T2D3 398 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 ZNF474Q6S9Z5 364 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 KYAT3Q6YP21 454 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 CCDC28AQ8IWP9 274 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 CPXCR1Q8N123 301 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 EVI5LQ96CN4 794 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 URB1-AS1Q96HZ7 61 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 CCDC138Q96M89 665 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 TRIM2Q9C040 744 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 PCDHAC1Q9H158 963 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 LAMP3Q9UQV4 416 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 CEP83Q9Y592 693 aa4.79□□□□□ -1.64
TRAPPC13-209ENST00000508304 KCNQ3O43525 872 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 DDNO94850 711 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 VIPP01282 170 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 ARP10275 920 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 TSHRP16473 764 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 SERPINB3P29508 390 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 PRIM2P49643 509 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 ART1P52961 327 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 CBFBQ13951 182 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 KRTAP24-1Q3LI83 254 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 ARL13BQ3SXY8 428 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 TMEM196Q5HYL7 178 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 FAM83BQ5T0W9 1011 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 FAM90A2PQ658T7 463 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 PARM1Q6UWI2 310 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 PRSS57Q6UWY2 283 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 DHRS13Q6UX07 377 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 TOGARAM2Q6ZUX3 1019 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 DPP9Q86TI2 863 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 C7orf57Q8NEG2 295 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 ASB12Q8WXK4 309 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 CLMNQ96JQ2 1002 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 WDR24Q96S15 920 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 HERPUD2Q9BSE4 406 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 ELOVL1Q9BW60 279 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 NAA15Q9BXJ9 866 aaKnown RBP4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 DCLK3Q9C098 648 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 ARFGAP3Q9NP61 516 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 SPAG4Q9NPE6 437 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 RXFP3Q9NSD7 469 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 KCNG2Q9UJ96 466 aa4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 ZMYND8Q9ULU4 1186 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC13-209ENST00000508304 NOTCH3Q9UM47 2321 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 A0A087WZ62 844 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 A0A1W2PPC4 97 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 SRGAP2BP0DMP2 458 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 MST1P26927 711 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 STAT6P42226 847 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 HALP42357 657 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 ERVFC1-1P60608 527 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 BTKQ06187 659 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 Q0VFX4 171 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 ATP1A4Q13733 1029 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 SLC5A9Q2M3M2 681 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 PRAMEF19Q5SWL8 479 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 FBXO38Q6PIJ6 1188 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 FAM83HQ6ZRV2 1179 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 KRT27Q7Z3Y8 459 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 CLASRPQ8N2M8 674 aaKnown RBP4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 OR52L2PQ8NGH6 319 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 CCT6BQ92526 530 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 NUDT22Q9BRQ3 303 aa4.77□□□□□ -1.65
TRAPPC13-209ENST00000508304 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms