RNA–Protein interactions for RNA: ENST00000505454.1

AC116563.1-201, humanhuman

TSL 3 BASIC

Gene AC116563.1, Length 396 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116563.1-201ENST00000505454 USP38Q8NB14 1042 aa2.54□□□□□ -2
AC116563.1-201ENST00000505454 MAFAQ8NHW3 353 aaPredicted RBP2.54□□□□□ -2
AC116563.1-201ENST00000505454 SUN3Q8TAQ9 357 aa2.54□□□□□ -2
AC116563.1-201ENST00000505454 NR4A3Q92570 626 aa2.54□□□□□ -2
AC116563.1-201ENST00000505454 MPP4Q96JB8 637 aa2.54□□□□□ -2
AC116563.1-201ENST00000505454 PAAF1Q9BRP4 392 aa2.54□□□□□ -2
AC116563.1-201ENST00000505454 SCNM1Q9BWG6 230 aa2.54□□□□□ -2
AC116563.1-201ENST00000505454 SEMA4BQ9NPR2 832 aaPredicted RBP2.54□□□□□ -2
AC116563.1-201ENST00000505454 WASH6PQ9NQA3 447 aa2.54□□□□□ -2
AC116563.1-201ENST00000505454 G6PC2Q9NQR9 355 aa2.54□□□□□ -2
AC116563.1-201ENST00000505454 MGAT4CQ9UBM8 478 aa2.54□□□□□ -2
AC116563.1-201ENST00000505454 NKX1-2Q9UD57 310 aaPredicted RBP2.54□□□□□ -2
AC116563.1-201ENST00000505454 UBE2J1Q9Y385 318 aaPredicted RBP2.54□□□□□ -2
AC116563.1-201ENST00000505454 GXYLT2A0PJZ3 443 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 RRN3P2A6NIE6 340 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 J3KTA2 159 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 CLIC1O00299 241 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 HOXC11O43248 304 aaPredicted RBP2.53□□□□□ -2
AC116563.1-201ENST00000505454 DNPH1O43598 174 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 SYF2O95926 243 aaKnown RBP2.53□□□□□ -2
AC116563.1-201ENST00000505454 IGKV3-20P01619 116 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 FGF2P09038 288 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 TMEM225BP0DP42 221 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 HGFP14210 728 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 CREB1P16220 341 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 ATF7P17544 494 aaPredicted RBP2.53□□□□□ -2
AC116563.1-201ENST00000505454 MMP8P22894 467 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 HTR7P34969 479 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 EIF4A1P60842 406 aaKnown RBP2.53□□□□□ -2
AC116563.1-201ENST00000505454 UBE3AQ05086 875 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 DDX10Q13206 875 aaKnown RBP2.53□□□□□ -2
AC116563.1-201ENST00000505454 TAF5Q15542 800 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 INPP5JQ15735 1006 aaPredicted RBP2.53□□□□□ -2
AC116563.1-201ENST00000505454 TIGD6Q17RP2 521 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 FAM110CQ1W6H9 321 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 NAA35Q5VZE5 725 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 ZNF324BQ6AW86 544 aaPredicted RBP2.53□□□□□ -2
AC116563.1-201ENST00000505454 CAPRIN2Q6IMN6 1127 aaKnown RBP2.53□□□□□ -2
AC116563.1-201ENST00000505454 RINT1Q6NUQ1 792 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 VSTM1Q6UX27 236 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 ZNF793Q6ZN11 406 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 B4GALNT4Q76KP1 1039 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 ANKS1BQ7Z6G8 1248 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 TRABD2AQ86V40 505 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 HERC6Q8IVU3 1022 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 TMEM57Q8N5G2 664 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.53□□□□□ -2
AC116563.1-201ENST00000505454 PPHLN1Q8NEY8 458 aaKnown RBP2.53□□□□□ -2
AC116563.1-201ENST00000505454 IGFBPL1Q8WX77 278 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 HERVK_113Q902F9 699 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 VPS50Q96JG6 964 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 TRAPPC9Q96Q05 1148 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 EIF3CQ99613 913 aaKnown RBP2.53□□□□□ -2
AC116563.1-201ENST00000505454 SENP7Q9BQF6 1050 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 TAF1DQ9H5J8 278 aaPredicted RBP2.53□□□□□ -2
AC116563.1-201ENST00000505454 NOD2Q9HC29 1040 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 KCNK9Q9NPC2 374 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 RIC8AQ9NPQ8 531 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 RIMKLBQ9ULI2 386 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 MAFFQ9ULX9 164 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 DAPP1Q9UN19 280 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 DRG1Q9Y295 367 aaKnown RBP2.53□□□□□ -2
AC116563.1-201ENST00000505454 SLC27A6Q9Y2P4 619 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 FER1L4A9Z1Z3 1794 aa2.53□□□□□ -2
AC116563.1-201ENST00000505454 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 FAM90A18PA6NE21 464 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 FAM90A16PA6NEW6 464 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 SAC3D1A6NKF1 404 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 FAM90A9PA6NNJ1 464 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 PRSS47A8MTI9 375 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 FAM90A5PA8MXJ8 464 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 H0Y3Z8 333 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 J3KRW8 73 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 EXOC5O00471 708 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 SEPT4O43236 478 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 EPB41L2O43491 1005 aaKnown RBP2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 TMPRSS11DO60235 418 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 TSPAN3O60637 253 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 TAF5LO75529 589 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 WDR47O94967 919 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 NDUFB8O95169 186 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 AGR2O95994 175 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 FAM90A15PP0C7V4 464 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 FAM90A14PP0C7W9 464 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 SERPINA4P29622 427 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 AKT1P31749 480 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 GSTM5P46439 218 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 HSF1Q00613 529 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 SLC14A1Q13336 389 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 TRPC3Q13507 836 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 CBFBQ13951 182 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 KCNJ12Q14500 433 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 KCNB1Q14721 858 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 GRM4Q14833 912 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 NFATC4Q14934 902 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 ANKRD1Q15327 319 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 RPS6KA2Q15349 733 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 SMAD1Q15797 465 aaKnown RBP2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 CTXN3Q4LDR2 81 aa2.52□□□□□ -2.01
AC116563.1-201ENST00000505454 ZNF569Q5MCW4 686 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms