RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 FAM163BP0C2L3 166 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 HGFP14210 728 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 COL8A1P27658 744 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 CD70P32970 193 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 ST8SIA6P61647 398 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 IRX6P78412 446 aaPredicted RBP13.04□□□□□ -0.32
LSM6-204ENST00000504181 ANKRD1Q15327 319 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 HNRNPA1L2Q32P51 320 aaKnown RBP13.04□□□□□ -0.32
LSM6-204ENST00000504181 PERM1Q5SV97 790 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 L1TD1Q5T7N2 865 aaKnown RBP13.04□□□□□ -0.32
LSM6-204ENST00000504181 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.04□□□□□ -0.32
LSM6-204ENST00000504181 KIAA0907Q7Z7F0 614 aaPredicted RBP13.04□□□□□ -0.32
LSM6-204ENST00000504181 SCD5Q86SK9 330 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 TADA2BQ86TJ2 420 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 ACOT1Q86TX2 421 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 ATCAYQ86WG3 371 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 FAM217AQ8IXS0 508 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 SRRM1Q8IYB3 904 aaKnown RBP13.04□□□□□ -0.32
LSM6-204ENST00000504181 SYCP3Q8IZU3 236 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 FBXO39Q8N4B4 442 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.04□□□□□ -0.32
LSM6-204ENST00000504181 WFDC5Q8TCV5 224 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 SLC2A14Q8TDB8 520 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 DUSP23Q9BVJ7 150 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 STRA6Q9BX79 667 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 CALN1Q9BXU9 219 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 MRPL44Q9H9J2 332 aaKnown RBP13.04□□□□□ -0.32
LSM6-204ENST00000504181 EPB41L5Q9HCM4 733 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 ZNF71Q9NQZ8 489 aaPredicted RBP13.04□□□□□ -0.32
LSM6-204ENST00000504181 KLHL11Q9NVR0 708 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 DMTF1Q9Y222 760 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 NEMP2A6NFY4 417 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 SCAMP1O15126 338 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 UGT1A5P35504 534 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 UQCRFS1P47985 274 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 ZNF542PQ5EBM4 170 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 C9orf64Q5T6V5 341 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 ZCCHC8Q6NZY4 707 aaKnown RBP13.03□□□□□ -0.32
LSM6-204ENST00000504181 BORAQ6PGQ7 559 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 SCARA5Q6ZMJ2 495 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 TICAM1Q8IUC6 712 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 WDR49Q8IV35 697 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 TPCN2Q8NHX9 752 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 SSC4DQ8WTU2 575 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 TNIP3Q96KP6 325 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.03□□□□□ -0.32
LSM6-204ENST00000504181 FAM49BQ9NUQ9 324 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 ACSL6Q9UKU0 697 aa13.03□□□□□ -0.32
LSM6-204ENST00000504181 PRRC2CQ9Y520 2896 aaKnown RBP13.02□□□□□ -0.33
LSM6-204ENST00000504181 SLC12A8A0AV02 714 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 VPS37CA5D8V6 355 aaPredicted RBP13.02□□□□□ -0.33
LSM6-204ENST00000504181 HHLA1C9JL84 531 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 PRAMEF26H0Y7S4 382 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 CLSTN1O94985 981 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 GCNT3O95395 438 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 ADH1BP00325 375 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 RNF224P0DH78 156 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 RALAP11233 206 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 ADORA2BP29275 332 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 DCTP40126 519 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 CD97P48960 835 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 SGSHP51688 502 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 SPIDRQ14159 915 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 SURF1Q15526 300 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 FHL5Q5TD97 284 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 RAB11FIP2Q7L804 512 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 CBWD2Q8IUF1 395 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 RAD54LQ92698 747 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 CALML4Q96GE6 196 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 FAM129BQ96TA1 746 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 HIVEP3Q5T1R4 2406 aa13.02□□□□□ -0.33
LSM6-204ENST00000504181 EME2A4GXA9 379 aaPredicted RBP13.01□□□□□ -0.33
LSM6-204ENST00000504181 ZNF233A6NK53 670 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 TTC34A8MYJ7 566 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 MUSKO15146 869 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 IL1BP01584 269 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 FAM200BP0CF97 657 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 DLATP10515 647 aaKnown RBP13.01□□□□□ -0.33
LSM6-204ENST00000504181 C5AR1P21730 350 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 DRD3P35462 400 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 NUDT1P36639 197 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 PSEN1P49768 467 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 CASP5P51878 434 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 METAP1P53582 386 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 OXCT1P55809 520 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 MYL6P60660 151 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 SETMARQ53H47 684 aaPredicted RBP13.01□□□□□ -0.33
LSM6-204ENST00000504181 CLEC20AQ6ZU45 233 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 B3GNT8Q7Z7M8 397 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 DSG4Q86SJ6 1040 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 ZFAND4Q86XD8 727 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 STK40Q8N2I9 435 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 FBXO18Q8NFZ0 1043 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 OR13H1Q8NG92 308 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 KLK6Q92876 244 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 ELMO3Q96BJ8 720 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 TMA16Q96EY4 203 aaKnown RBP13.01□□□□□ -0.33
LSM6-204ENST00000504181 MRGPRX3Q96LB0 322 aa13.01□□□□□ -0.33
LSM6-204ENST00000504181 CDK5RAP1Q96SZ6 601 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms