RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ATG2BQ96BY7 2078 aa25.87■■□□□ 1.73
LSM6-202ENST00000502781 PRPSAP2O60256 369 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 SRGAP2O75044 1071 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 PROSCO94903 275 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 IL1R2P27930 398 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 HOXC13P31276 330 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 TIE1P35590 1138 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 FUT11Q495W5 492 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 ERMARDQ5T6L9 678 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 DAB2IPQ5VWQ8 1189 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 EGFLAMQ63HQ2 1017 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 SYT13Q7L8C5 426 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 ZNF513Q8N8E2 541 aaPredicted RBP25.86■■□□□ 1.73
LSM6-202ENST00000502781 SNRNP25Q9BV90 132 aaKnown RBP25.86■■□□□ 1.73
LSM6-202ENST00000502781 ZYG11BQ9C0D3 744 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 RETREG1Q9H6L5 497 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 THAP10Q9P2Z0 257 aaPredicted RBP25.86■■□□□ 1.73
LSM6-202ENST00000502781 PCSK1NQ9UHG2 260 aa25.86■■□□□ 1.73
LSM6-202ENST00000502781 REXO2Q9Y3B8 237 aaKnown RBP25.86■■□□□ 1.73
LSM6-202ENST00000502781 MYO18AQ92614 2054 aaKnown RBP25.86■■□□□ 1.73
LSM6-202ENST00000502781 MUC6Q6W4X9 2439 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.85■■□□□ 1.73
LSM6-202ENST00000502781 LAMTOR5O43504 91 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 TCF4P15884 667 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 CXCL12P48061 93 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 MRE11P49959 708 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 PLK1P53350 603 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 OXCT1P55809 520 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 SATB1Q01826 763 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 ZNF177Q13360 481 aaPredicted RBP25.85■■□□□ 1.73
LSM6-202ENST00000502781 SLC12A1Q13621 1099 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 DMC1Q14565 340 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 ALLCQ8N6M5 410 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 OR52K2Q8NGK3 314 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 TTC17Q96AE7 1141 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 LUC7LQ9NQ29 371 aaKnown RBP25.85■■□□□ 1.73
LSM6-202ENST00000502781 FBXO4Q9UKT5 387 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 MMP17Q9ULZ9 603 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 AP4E1Q9UPM8 1137 aa25.85■■□□□ 1.73
LSM6-202ENST00000502781 NPC1O15118 1278 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 MAN1A1P33908 653 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 HADHBP55084 474 aaKnown RBP25.84■■□□□ 1.73
LSM6-202ENST00000502781 SLC25A11Q02978 314 aaKnown RBP25.84■■□□□ 1.73
LSM6-202ENST00000502781 ENPP2Q13822 863 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 ANGPT1Q15389 498 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 CA9Q16790 459 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 BOLA3Q53S33 107 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 MBLAC2Q68D91 279 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 NLRP14Q86W24 1093 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 PRSS33Q8NF86 280 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 UCMAQ8WVF2 138 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 ALG14Q96F25 216 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 ACOX2Q99424 681 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 GPATCH2LQ9NWQ4 482 aa25.84■■□□□ 1.73
LSM6-202ENST00000502781 ADAM23O75077 832 aa25.83■■□□□ 1.73
LSM6-202ENST00000502781 KLF8O95600 359 aaPredicted RBP25.83■■□□□ 1.73
LSM6-202ENST00000502781 TDGF1P13385 188 aa25.83■■□□□ 1.73
LSM6-202ENST00000502781 RHOQP17081 205 aa25.83■■□□□ 1.73
LSM6-202ENST00000502781 PLEKHG6Q3KR16 790 aa25.83■■□□□ 1.73
LSM6-202ENST00000502781 PITRM1Q5JRX3 1037 aa25.83■■□□□ 1.73
LSM6-202ENST00000502781 TRMT11Q7Z4G4 463 aaKnown RBP25.83■■□□□ 1.73
LSM6-202ENST00000502781 SETD3Q86TU7 594 aaPredicted RBP25.83■■□□□ 1.73
LSM6-202ENST00000502781 TXNDC5Q8NBS9 432 aaKnown RBP25.83■■□□□ 1.73
LSM6-202ENST00000502781 TBC1D31Q96DN5 1066 aa25.83■■□□□ 1.73
LSM6-202ENST00000502781 CIPCQ9C0C6 399 aa25.83■■□□□ 1.73
LSM6-202ENST00000502781 ZDHHC4Q9NPG8 344 aa25.83■■□□□ 1.73
LSM6-202ENST00000502781 POLR3BQ9NW08 1133 aaPredicted RBP25.83■■□□□ 1.73
LSM6-202ENST00000502781 OR51B4Q9Y5P0 310 aa25.83■■□□□ 1.73
LSM6-202ENST00000502781 A0A0A6YYK5 440 aaPredicted RBP25.82■■□□□ 1.72
LSM6-202ENST00000502781 K7ESF4 209 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 SGK1O00141 431 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 IPO7O95373 1038 aaKnown RBP25.82■■□□□ 1.72
LSM6-202ENST00000502781 NTSR1P30989 418 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 HTR7P34969 479 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 CSKP41240 450 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 ARHGAP25P42331 645 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 TCF15Q12870 199 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 CPNE8Q86YQ8 564 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 CCDC33Q8N5R6 958 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 TEKT4Q8WW24 435 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 EPAS1Q99814 870 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 GABRG3Q99928 467 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 TMEM248Q9NWD8 314 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 DOCK4Q8N1I0 1966 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 RCCD1A6NED2 376 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 DLDP09622 509 aaKnown RBP25.82■■□□□ 1.72
LSM6-202ENST00000502781 MZF1P28698 734 aaPredicted RBP25.82■■□□□ 1.72
LSM6-202ENST00000502781 HOXA6P31267 233 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 E2F5Q15329 346 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 PTPRNQ16849 979 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 EOGTQ5NDL2 527 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 TXNRD3NBQ6F5E7 133 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 TFAP2DQ7Z6R9 452 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 APCDD1Q8J025 514 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 ACRBPQ8NEB7 543 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 SORCS1Q8WY21 1168 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 NELL1Q92832 810 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 FEM1AQ9BSK4 669 aa25.82■■□□□ 1.72
LSM6-202ENST00000502781 DHX35Q9H5Z1 703 aaKnown RBP25.82■■□□□ 1.72
LSM6-202ENST00000502781 TFR2Q9UP52 801 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms