RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 RABGAP1LQ5R372 815 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 ACBD5Q5T8D3 534 aaPredicted RBP11.61□□□□□ -0.55
ERCC8-208ENST00000497892 SH3PXD2AQ5TCZ1 1133 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 TMEM215Q68D42 235 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 FBXL22Q6P050 247 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 KIAA0907Q7Z7F0 614 aaPredicted RBP11.61□□□□□ -0.55
ERCC8-208ENST00000497892 FAM131BQ86XD5 332 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 DNAAF5Q86Y56 855 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 AHI1Q8N157 1196 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 CCDC33Q8N5R6 958 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 CAMKK1Q8N5S9 505 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 TXNDC5Q8NBS9 432 aaKnown RBP11.61□□□□□ -0.55
ERCC8-208ENST00000497892 OR8K1Q8NGG5 319 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 FIBINQ8TAL6 211 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 WFIKKN2Q8TEU8 576 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 FAM172AQ8WUF8 416 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 ZNF653Q96CK0 615 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 TRIM11Q96F44 468 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 LMLNQ96KR4 655 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 HHIPQ96QV1 700 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 CNPY3Q9BT09 278 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.61□□□□□ -0.55
ERCC8-208ENST00000497892 ABCB8Q9NUT2 735 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 ZSCAN32Q9NX65 697 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 STIM2Q9P246 746 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 GGA2Q9UJY4 613 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 NENFQ9UMX5 172 aa11.61□□□□□ -0.55
ERCC8-208ENST00000497892 FCF1Q9Y324 198 aaKnown RBP11.61□□□□□ -0.55
ERCC8-208ENST00000497892 USP34Q70CQ2 3546 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 CCDC163A0A0D9SF12 145 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 PROB1E7EW31 1015 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 NPC1O15118 1278 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 CCP110O43303 1012 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 LILRB5O75023 590 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 APBB3O95704 486 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 PABPC1P11940 636 aaKnown RBP11.6□□□□□ -0.55
ERCC8-208ENST00000497892 HNRNPLP14866 589 aaKnown RBP eCLIP11.6□□□□□ -0.55
ERCC8-208ENST00000497892 NTSR1P30989 418 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 CD70P32970 193 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 IRAK1P51617 712 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 DGKEP52429 567 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 OGDHQ02218 1023 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 ENPP2Q13822 863 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 C5orf22Q49AR2 442 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 RAB6CQ53S08 254 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 DCUN1D2Q6PH85 259 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 BRICD5Q6PL45 260 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 TMC6Q7Z403 805 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 ADIPOR2Q86V24 386 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 CIR1Q86X95 450 aaPredicted RBP11.6□□□□□ -0.55
ERCC8-208ENST00000497892 CNGA4Q8IV77 575 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 ZNF683Q8IZ20 524 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 CHPFQ8IZ52 775 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 CCAR2Q8N163 923 aaKnown RBP11.6□□□□□ -0.55
ERCC8-208ENST00000497892 CARNMT1Q8N4J0 409 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 TSTD1Q8NFU3 115 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 IGSF8Q969P0 613 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 NTAN1Q96AB6 310 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 MRFAP1L1Q96HT8 127 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 C1orf74Q96LT6 269 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 RPRD1AQ96P16 312 aaPredicted RBP11.6□□□□□ -0.55
ERCC8-208ENST00000497892 HAPLN3Q96S86 360 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 ACOX2Q99424 681 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 GABRG3Q99928 467 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 CIPCQ9C0C6 399 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 RAB6CQ9H0N0 254 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 TMPRSS4Q9NRS4 437 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 ELOVL2Q9NXB9 296 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 CNOT8Q9UFF9 292 aaKnown RBP11.6□□□□□ -0.55
ERCC8-208ENST00000497892 VANGL2Q9ULK5 521 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 SCINQ9Y6U3 715 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 R4GN57 208 aa11.6□□□□□ -0.55
ERCC8-208ENST00000497892 NYNRINQ9P2P1 1898 aaKnown RBP11.59□□□□□ -0.55
ERCC8-208ENST00000497892 ZFHX2Q9C0A1 2572 aaPredicted RBP11.59□□□□□ -0.55
ERCC8-208ENST00000497892 IGLV3-10A0A075B6K4 115 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 SSU72P8A0A1W2PR75 194 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 TMEM191CA6NGB0 347 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 H0Y626 953 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 TIMM44O43615 452 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 HOXB2P14652 356 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 CD46P15529 392 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 ADRA1BP35368 520 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 EIF4A3P38919 411 aaKnown RBP11.59□□□□□ -0.55
ERCC8-208ENST00000497892 FNTBP49356 437 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 ZNF75DP51815 510 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 ZNF252P-AS1Q0IIN9 211 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 SCAPQ12770 1279 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 LMAN2Q12907 356 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 E2F5Q15329 346 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 ARL13BQ3SXY8 428 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 FUT11Q495W5 492 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 FSCBQ5H9T9 825 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 ARTNQ5T4W7 220 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 ALKBH5Q6P6C2 394 aaKnown RBP11.59□□□□□ -0.55
ERCC8-208ENST00000497892 CHST9Q7L1S5 443 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 C14orf80Q86SX3 495 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 LONP2Q86WA8 852 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 RASSF3Q86WH2 238 aa11.59□□□□□ -0.55
ERCC8-208ENST00000497892 CCDC117Q8IWD4 279 aaPredicted RBP11.59□□□□□ -0.55
ERCC8-208ENST00000497892 FNIP1Q8TF40 1166 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms