RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 WASH3PC4AMC7 463 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 SRGAP2O75044 1071 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 ENDOD1O94919 500 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 ACADMP11310 421 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 ZNF143P52747 638 aaPredicted RBP16.87■□□□□ 0.29
SF3A1-209ENST00000496189 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
SF3A1-209ENST00000496189 FUT11Q495W5 492 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 PITRM1Q5JRX3 1037 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 WDR59Q6PJI9 974 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 KIAA1324Q6UXG2 1013 aaKnown RBP16.87■□□□□ 0.29
SF3A1-209ENST00000496189 ADIPOR2Q86V24 386 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 WFDC5Q8TCV5 224 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 CYB5D2Q8WUJ1 264 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 SORCS1Q8WY21 1168 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 ZNF653Q96CK0 615 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 CNPY3Q9BT09 278 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 ISCUQ9H1K1 167 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 TAS2R14Q9NYV8 317 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 CALCOCO1Q9P1Z2 691 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 IMPACTQ9P2X3 320 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 RAD54BQ9Y620 910 aa16.87■□□□□ 0.29
SF3A1-209ENST00000496189 A0A087X0T9 212 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 A0A1W2PQF6 199 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 GOLGA6L3A6NEY3 463 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 E9PAM4 449 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 RNF8O76064 485 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 GJB6O95452 261 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 RETP07949 1114 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 SRPRAP08240 638 aaKnown RBP16.86■□□□□ 0.29
SF3A1-209ENST00000496189 FAM228BP0C875 321 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 CHRM1P11229 460 aaPredicted RBP16.86■□□□□ 0.29
SF3A1-209ENST00000496189 GABRG2P18507 467 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 GGCXP38435 758 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 CSKP41240 450 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 ATXN1P54253 815 aaKnown RBP16.86■□□□□ 0.29
SF3A1-209ENST00000496189 AIF1P55008 147 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 ECT2LQ008S8 904 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 PLEKHG6Q3KR16 790 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 EFHC2Q5JST6 749 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 CCDC122Q5T0U0 273 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 C6orf118Q5T5N4 469 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 TMEM215Q68D42 235 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 TRNP1Q6NT89 227 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 SCYL2Q6P3W7 929 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 ALKBH5Q6P6C2 394 aaKnown RBP16.86■□□□□ 0.29
SF3A1-209ENST00000496189 BNIPLQ7Z465 357 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 CIR1Q86X95 450 aaPredicted RBP16.86■□□□□ 0.29
SF3A1-209ENST00000496189 OLIG1Q8TAK6 271 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 IGSF8Q969P0 613 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 TTC17Q96AE7 1141 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 MYEOVQ96EZ4 313 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 LOXL4Q96JB6 756 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 NCAPGQ9BPX3 1015 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 ADAM33Q9BZ11 813 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 MUC3BQ9H195 1237 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 PRDM16Q9HAZ2 1276 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 CNOT8Q9UFF9 292 aaKnown RBP16.86■□□□□ 0.29
SF3A1-209ENST00000496189 SLC25A13Q9UJS0 675 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 VPS28Q9UK41 221 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 HCN2Q9UL51 889 aa16.86■□□□□ 0.29
SF3A1-209ENST00000496189 RNASEH1O60930 286 aaKnown RBP16.85■□□□□ 0.29
SF3A1-209ENST00000496189 RHOCP08134 193 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 PSMA2P25787 234 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 HOXC13P31276 330 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 ADRA1BP35368 520 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 KRT83P78385 493 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 ENPP2Q13822 863 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 SLC18A3Q16572 532 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 FSCBQ5H9T9 825 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 SLC36A4Q6YBV0 504 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 SLFN11Q7Z7L1 901 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 SETD3Q86TU7 594 aaPredicted RBP16.85■□□□□ 0.29
SF3A1-209ENST00000496189 FAM160A2Q8N612 972 aaPredicted RBP16.85■□□□□ 0.29
SF3A1-209ENST00000496189 TC2NQ8N9U0 490 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 KDM1BQ8NB78 822 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 CENPIQ92674 756 aaPredicted RBP16.85■□□□□ 0.29
SF3A1-209ENST00000496189 PRCCQ92733 491 aaPredicted RBP16.85■□□□□ 0.29
SF3A1-209ENST00000496189 ERLEC1Q96DZ1 483 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 ZC3H10Q96K80 434 aaKnown RBP16.85■□□□□ 0.29
SF3A1-209ENST00000496189 PANX2Q96RD6 677 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 ZYG11BQ9C0D3 744 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 RETREG1Q9H6L5 497 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 NHEJ1Q9H9Q4 299 aaPredicted RBP16.85■□□□□ 0.29
SF3A1-209ENST00000496189 MYO1AQ9UBC5 1043 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 OR12D3Q9UGF7 316 aa16.85■□□□□ 0.29
SF3A1-209ENST00000496189 ZFHX2Q9C0A1 2572 aaPredicted RBP16.84■□□□□ 0.29
SF3A1-209ENST00000496189 CCP110O43303 1012 aa16.84■□□□□ 0.29
SF3A1-209ENST00000496189 FOXD2O60548 495 aaPredicted RBP16.84■□□□□ 0.29
SF3A1-209ENST00000496189 NDUFV2P19404 249 aa16.84■□□□□ 0.29
SF3A1-209ENST00000496189 OR1E1P30953 314 aa16.84■□□□□ 0.29
SF3A1-209ENST00000496189 P2RY2P41231 377 aa16.84■□□□□ 0.29
SF3A1-209ENST00000496189 RPL7AP62424 266 aaKnown RBP16.84■□□□□ 0.29
SF3A1-209ENST00000496189 GFPT1Q06210 699 aaPredicted RBP16.84■□□□□ 0.29
SF3A1-209ENST00000496189 SFSWAPQ12872 951 aaKnown RBP16.84■□□□□ 0.29
SF3A1-209ENST00000496189 MAMLD1Q13495 774 aa16.84■□□□□ 0.29
SF3A1-209ENST00000496189 C5orf22Q49AR2 442 aa16.84■□□□□ 0.29
SF3A1-209ENST00000496189 PLEKHA7Q6IQ23 1121 aa16.84■□□□□ 0.29
SF3A1-209ENST00000496189 KIAA1211LQ6NV74 962 aa16.84■□□□□ 0.29
SF3A1-209ENST00000496189 RWDD4Q6NW29 188 aaKnown RBP16.84■□□□□ 0.29
SF3A1-209ENST00000496189 LPCAT2Q7L5N7 544 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms