RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 XYLT1Q86Y38 959 aa25.01■■□□□ 1.59
HLA-C-209ENST00000495835 CCAR2Q8N163 923 aaKnown RBP25.01■■□□□ 1.59
HLA-C-209ENST00000495835 MRGPRX3Q96LB0 322 aa25.01■■□□□ 1.59
HLA-C-209ENST00000495835 RSPH9Q9H1X1 276 aaPredicted RBP25.01■■□□□ 1.59
HLA-C-209ENST00000495835 ITIH6Q6UXX5 1313 aa25.01■■□□□ 1.59
HLA-C-209ENST00000495835 SYNJ2BP-COX16A0A087WUM0 186 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 UPK3BL1B0FP48 263 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 UPK3BL2E5RIL1 263 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 ARHGAP33O14559 1287 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 RNASEH1O60930 286 aaKnown RBP25■■□□□ 1.59
HLA-C-209ENST00000495835 NNMTP40261 264 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 CXCR3P49682 368 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 COPB1P53618 953 aaKnown RBP25■■□□□ 1.59
HLA-C-209ENST00000495835 JAM2P57087 298 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 RPS14P62263 151 aaKnown RBP25■■□□□ 1.59
HLA-C-209ENST00000495835 AUHQ13825 339 aaKnown RBP25■■□□□ 1.59
HLA-C-209ENST00000495835 SLC25A52Q3SY17 297 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 TTC31Q49AM3 519 aaPredicted RBP25■■□□□ 1.59
HLA-C-209ENST00000495835 ZNF776Q68DI1 518 aaPredicted RBP25■■□□□ 1.59
HLA-C-209ENST00000495835 FBXL22Q6P050 247 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 ZDHHC5Q9C0B5 715 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 WDCPQ9H6R7 721 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 ARHGEF38Q9NXL2 777 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 COX16Q9P0S2 106 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 PCDH15Q96QU1 1955 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 CACNA1EQ15878 2313 aa25■■□□□ 1.59
HLA-C-209ENST00000495835 MEI4A8MW99 385 aa24.99■■□□□ 1.59
HLA-C-209ENST00000495835 CEACAM1P13688 526 aa24.99■■□□□ 1.59
HLA-C-209ENST00000495835 SOX5P35711 763 aa24.99■■□□□ 1.59
HLA-C-209ENST00000495835 POLR2FP61218 127 aaKnown RBP24.99■■□□□ 1.59
HLA-C-209ENST00000495835 NOMO3P69849 1222 aa24.99■■□□□ 1.59
HLA-C-209ENST00000495835 CDR2Q01850 454 aa24.99■■□□□ 1.59
HLA-C-209ENST00000495835 FAM102AQ5T9C2 384 aaPredicted RBP24.99■■□□□ 1.59
HLA-C-209ENST00000495835 TAF3Q5VWG9 929 aa24.99■■□□□ 1.59
HLA-C-209ENST00000495835 RNF219Q5W0B1 726 aaPredicted RBP24.99■■□□□ 1.59
HLA-C-209ENST00000495835 MMS22LQ6ZRQ5 1243 aa24.99■■□□□ 1.59
HLA-C-209ENST00000495835 USP30Q70CQ3 517 aa24.99■■□□□ 1.59
HLA-C-209ENST00000495835 ZNF366Q8N895 744 aa24.99■■□□□ 1.59
HLA-C-209ENST00000495835 C1orf74Q96LT6 269 aa24.99■■□□□ 1.59
HLA-C-209ENST00000495835 RPRD1AQ96P16 312 aaPredicted RBP24.99■■□□□ 1.59
HLA-C-209ENST00000495835 SGK2Q9HBY8 427 aa24.99■■□□□ 1.59
HLA-C-209ENST00000495835 NOCTQ9UK39 431 aaKnown RBP24.99■■□□□ 1.59
HLA-C-209ENST00000495835 SIK3Q9Y2K2 1263 aa24.99■■□□□ 1.59
HLA-C-209ENST00000495835 EDDM13A0A1B0GTR0 161 aa24.98■■□□□ 1.59
HLA-C-209ENST00000495835 A0A1B0GTW7 788 aa24.98■■□□□ 1.59
HLA-C-209ENST00000495835 PAGE1O75459 146 aa24.98■■□□□ 1.59
HLA-C-209ENST00000495835 CLDN11O75508 207 aa24.98■■□□□ 1.59
HLA-C-209ENST00000495835 MMEP08473 750 aa24.98■■□□□ 1.59
HLA-C-209ENST00000495835 CDK11BP21127 795 aaKnown RBP24.98■■□□□ 1.59
HLA-C-209ENST00000495835 DCAF12L1Q5VU92 463 aa24.98■■□□□ 1.59
HLA-C-209ENST00000495835 TRIM72Q6ZMU5 477 aa24.98■■□□□ 1.59
HLA-C-209ENST00000495835 SPAG5Q96R06 1193 aa24.98■■□□□ 1.59
HLA-C-209ENST00000495835 BTBD1Q9H0C5 482 aa24.98■■□□□ 1.59
HLA-C-209ENST00000495835 FAM207AQ9NSI2 230 aaPredicted RBP24.98■■□□□ 1.59
HLA-C-209ENST00000495835 PIGVQ9NUD9 493 aa24.98■■□□□ 1.59
HLA-C-209ENST00000495835 NCKAP1Q9Y2A7 1128 aa24.98■■□□□ 1.59
HLA-C-209ENST00000495835 HS3ST4Q9Y661 456 aa24.98■■□□□ 1.59
HLA-C-209ENST00000495835 ADAMTS9Q9P2N4 1935 aa24.97■■□□□ 1.59
HLA-C-209ENST00000495835 LGALS16A8MUM7 142 aa24.97■■□□□ 1.59
HLA-C-209ENST00000495835 CYP1A1P04798 512 aaPredicted RBP24.97■■□□□ 1.59
HLA-C-209ENST00000495835 ZNF18P17022 549 aa24.97■■□□□ 1.59
HLA-C-209ENST00000495835 STAT1P42224 750 aa24.97■■□□□ 1.59
HLA-C-209ENST00000495835 SULT1E1P49888 294 aa24.97■■□□□ 1.59
HLA-C-209ENST00000495835 RNASE9P60153 205 aaKnown RBP24.97■■□□□ 1.59
HLA-C-209ENST00000495835 OTUD1Q5VV17 481 aaPredicted RBP24.97■■□□□ 1.59
HLA-C-209ENST00000495835 APCDD1Q8J025 514 aa24.97■■□□□ 1.59
HLA-C-209ENST00000495835 ERGIC2Q96RQ1 377 aa24.97■■□□□ 1.59
HLA-C-209ENST00000495835 NAT10Q9H0A0 1025 aaKnown RBP24.97■■□□□ 1.59
HLA-C-209ENST00000495835 TKTL2Q9H0I9 626 aa24.97■■□□□ 1.59
HLA-C-209ENST00000495835 TMEM59LQ9UK28 342 aa24.97■■□□□ 1.59
HLA-C-209ENST00000495835 TBC1D30Q9Y2I9 924 aa24.97■■□□□ 1.59
HLA-C-209ENST00000495835 ASCC3Q8N3C0 2202 aaKnown RBP24.97■■□□□ 1.59
HLA-C-209ENST00000495835 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.96■■□□□ 1.59
HLA-C-209ENST00000495835 SIN3BO75182 1162 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 GFPT2O94808 682 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 MAPK8P45983 427 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 CDH4P55283 916 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 DEUP1Q05D60 604 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 SLC14A1Q13336 389 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 ZNF177Q13360 481 aaPredicted RBP24.96■■□□□ 1.59
HLA-C-209ENST00000495835 C9orf64Q5T6V5 341 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 N4BP2L1Q5TBK1 243 aaPredicted RBP24.96■■□□□ 1.59
HLA-C-209ENST00000495835 CXorf57Q6NSI4 855 aaKnown RBP24.96■■□□□ 1.59
HLA-C-209ENST00000495835 BNIPLQ7Z465 357 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 HDDC3Q8N4P3 179 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 NEK11Q8NG66 645 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 CPA5Q8WXQ8 436 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 IGSF8Q969P0 613 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 SLC32A1Q9H598 525 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 OSGEPQ9NPF4 335 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 DNAAF2Q9NVR5 837 aaKnown RBP24.96■■□□□ 1.59
HLA-C-209ENST00000495835 VANGL2Q9ULK5 521 aa24.96■■□□□ 1.59
HLA-C-209ENST00000495835 OPHN1O60890 802 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 MMP8P22894 467 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 ACSL1P33121 698 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 CTSOP43234 321 aaPredicted RBP24.95■■□□□ 1.58
HLA-C-209ENST00000495835 KLK7P49862 253 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 NOVA1P51513 510 aaKnown RBP24.95■■□□□ 1.58
HLA-C-209ENST00000495835 SEMA3BQ13214 749 aa24.95■■□□□ 1.58
HLA-C-209ENST00000495835 NCAPHQ15003 741 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms