RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 CST6Q15828 149 aa22.85■■□□□ 1.25
HDDC3-203ENST00000494993 C9orf64Q5T6V5 341 aa22.85■■□□□ 1.25
HDDC3-203ENST00000494993 ADAT2Q7Z6V5 191 aaKnown RBP22.85■■□□□ 1.25
HDDC3-203ENST00000494993 LGI2Q8N0V4 545 aa22.85■■□□□ 1.25
HDDC3-203ENST00000494993 CYTH4Q9UIA0 394 aa22.85■■□□□ 1.25
HDDC3-203ENST00000494993 LHX6Q9UPM6 363 aa22.85■■□□□ 1.25
HDDC3-203ENST00000494993 LAMA5O15230 3695 aa22.85■■□□□ 1.25
HDDC3-203ENST00000494993 APC2O95996 2303 aa22.85■■□□□ 1.25
HDDC3-203ENST00000494993 COL5A1P20908 1838 aaPredicted RBP22.85■■□□□ 1.25
HDDC3-203ENST00000494993 A0A1W2PP55 124 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 TARSL2A2RTX5 802 aaKnown RBP22.84■■□□□ 1.25
HDDC3-203ENST00000494993 FAM47DPA6NHR8 397 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 TTC34A8MYJ7 566 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 E5RJQ4 531 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 H0Y8X5 98 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 BIN1O00499 593 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 KCNK3O14649 394 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 MED7O43513 233 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 PCDHGA12O60330 932 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 LETM1O95202 739 aaPredicted RBP22.84■■□□□ 1.25
HDDC3-203ENST00000494993 TACR2P21452 398 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 GALCP54803 685 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 PAK1Q13153 545 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 ZC3H12AQ5D1E8 599 aaKnown RBP22.84■■□□□ 1.25
HDDC3-203ENST00000494993 KCNT1Q5JUK3 1230 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 RAP1GAP2Q684P5 730 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 LRSAM1Q6UWE0 723 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 TMPRSS7Q7RTY8 843 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 CHSY1Q86X52 802 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 MMAAQ8IVH4 418 aaKnown RBP22.84■■□□□ 1.25
HDDC3-203ENST00000494993 ZNF606Q8WXB4 792 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 BTN2A3PQ96KV6 586 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 SRRTQ9BXP5 876 aaKnown RBP22.84■■□□□ 1.25
HDDC3-203ENST00000494993 CCDC86Q9H6F5 360 aaKnown RBP22.84■■□□□ 1.25
HDDC3-203ENST00000494993 POPDC2Q9HBU9 364 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 UBE2TQ9NPD8 197 aaPredicted RBP22.84■■□□□ 1.25
HDDC3-203ENST00000494993 TJP2Q9UDY2 1190 aa22.84■■□□□ 1.25
HDDC3-203ENST00000494993 EDDM13A0A1B0GTR0 161 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 A0A1W2PPC4 97 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 TRUB2O95900 331 aaKnown RBP22.83■■□□□ 1.25
HDDC3-203ENST00000494993 IGLV3-25P01717 112 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 GRK6P43250 576 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 RACK1P63244 317 aaKnown RBP22.83■■□□□ 1.25
HDDC3-203ENST00000494993 ECT2LQ008S8 904 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 NCEH1Q6PIU2 408 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 TMEM110Q86TL2 294 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 APCDD1Q8J025 514 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 NEUROG2Q9H2A3 272 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 ADAMTS1Q9UHI8 967 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 SLCO3A1Q9UIG8 710 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 FZD4Q9ULV1 537 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 CEP83Q9Y592 693 aa22.83■■□□□ 1.25
HDDC3-203ENST00000494993 ATRXP46100 2492 aa22.83■■□□□ 1.24
HDDC3-203ENST00000494993 LRRC72A6NJI9 287 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 GOLGA8CPA6NN73 597 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 VILLO15195 856 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 THAP12O43422 761 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 RNASEH2AO75792 299 aaKnown RBP22.82■■□□□ 1.24
HDDC3-203ENST00000494993 GNA15P30679 374 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 SLC8A1P32418 973 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 YWHAZP63104 245 aaKnown RBP22.82■■□□□ 1.24
HDDC3-203ENST00000494993 RNF219Q5W0B1 726 aaPredicted RBP22.82■■□□□ 1.24
HDDC3-203ENST00000494993 ATP6V0D2Q8N8Y2 350 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 OR2T34Q8NGX1 318 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 SLC6A18Q96N87 628 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 MED15Q96RN5 788 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 FAM129BQ96TA1 746 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 OMDQ99983 421 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 ACE2Q9BYF1 805 aaPredicted RBP22.82■■□□□ 1.24
HDDC3-203ENST00000494993 THAP9Q9H5L6 903 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 KNTC1P50748 2209 aa22.82■■□□□ 1.24
HDDC3-203ENST00000494993 NBEAQ8NFP9 2946 aa22.81■■□□□ 1.24
HDDC3-203ENST00000494993 F5H5T6 163 aa22.81■■□□□ 1.24
HDDC3-203ENST00000494993 TNFSF14O43557 240 aa22.81■■□□□ 1.24
HDDC3-203ENST00000494993 DFNA5O60443 496 aa22.81■■□□□ 1.24
HDDC3-203ENST00000494993 C21orf59P57076 290 aa22.81■■□□□ 1.24
HDDC3-203ENST00000494993 PITX1P78337 314 aaPredicted RBP22.81■■□□□ 1.24
HDDC3-203ENST00000494993 EIF4EBP2Q13542 120 aaPredicted RBP22.81■■□□□ 1.24
HDDC3-203ENST00000494993 ENOSF1Q7L5Y1 443 aa22.81■■□□□ 1.24
HDDC3-203ENST00000494993 RPL10LQ96L21 214 aaKnown RBP22.81■■□□□ 1.24
HDDC3-203ENST00000494993 EBF2Q9HAK2 575 aa22.81■■□□□ 1.24
HDDC3-203ENST00000494993 ACP6Q9NPH0 428 aa22.81■■□□□ 1.24
HDDC3-203ENST00000494993 C10orf142B7Z368 130 aa22.8■■□□□ 1.24
HDDC3-203ENST00000494993 HOXB3P14651 431 aaPredicted RBP22.8■■□□□ 1.24
HDDC3-203ENST00000494993 PSMD8P48556 350 aa22.8■■□□□ 1.24
HDDC3-203ENST00000494993 STK19P49842 368 aaPredicted RBP22.8■■□□□ 1.24
HDDC3-203ENST00000494993 IL9RQ01113 521 aa22.8■■□□□ 1.24
HDDC3-203ENST00000494993 PDCLQ13371 301 aa22.8■■□□□ 1.24
HDDC3-203ENST00000494993 SLC12A1Q13621 1099 aa22.8■■□□□ 1.24
HDDC3-203ENST00000494993 INAVAQ3KP66 663 aa22.8■■□□□ 1.24
HDDC3-203ENST00000494993 STK40Q8N2I9 435 aa22.8■■□□□ 1.24
HDDC3-203ENST00000494993 AADATQ8N5Z0 425 aa22.8■■□□□ 1.24
HDDC3-203ENST00000494993 MDM1Q8TC05 714 aa22.8■■□□□ 1.24
HDDC3-203ENST00000494993 PTPRN2Q92932 1015 aa22.8■■□□□ 1.24
HDDC3-203ENST00000494993 PRMT1Q99873 361 aaKnown RBP22.8■■□□□ 1.24
HDDC3-203ENST00000494993 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.8■■□□□ 1.24
HDDC3-203ENST00000494993 ITPR1Q14643 2758 aa22.8■■□□□ 1.24
HDDC3-203ENST00000494993 A0A1B0GTQ1 180 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 KCNU1A8MYU2 1149 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 FGFR1OPO95684 399 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms