RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SKILP12757 684 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 TACR2P21452 398 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 HNRNPH3P31942 346 aaKnown RBP9.07□□□□□ -0.96
ITGB1-217ENST00000494395 GBP1P32455 592 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 PTPN9P43378 593 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 SULT1E1P49888 294 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 ATXN1P54253 815 aaKnown RBP9.07□□□□□ -0.96
ITGB1-217ENST00000494395 RPS24P62847 133 aaKnown RBP9.07□□□□□ -0.96
ITGB1-217ENST00000494395 ZBED6P86452 979 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 KLHL30Q0D2K2 578 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 ENPP2Q13822 863 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 DMC1Q14565 340 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 CRY1Q16526 586 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 CCDC14Q49A88 953 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 C5orf22Q49AR2 442 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 C2orf27AQ580R0 203 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 BRMS1LQ5PSV4 323 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 EGFLAMQ63HQ2 1017 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 RAP1GAP2Q684P5 730 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 SARM1Q6SZW1 724 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 WDR5BQ86VZ2 330 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 RASSF3Q86WH2 238 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 GAS2L3Q86XJ1 694 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 CYP4X1Q8N118 509 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 ALLCQ8N6M5 410 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 EMC1Q8N766 993 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 ZNF513Q8N8E2 541 aaPredicted RBP9.07□□□□□ -0.96
ITGB1-217ENST00000494395 DDI1Q8WTU0 396 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 CENPIQ92674 756 aaPredicted RBP9.07□□□□□ -0.96
ITGB1-217ENST00000494395 CFAP57Q96MR6 1250 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 ZDHHC4Q9NPG8 344 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 RAB6BQ9NRW1 208 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 STAP1Q9ULZ2 295 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 DMDP11532 3685 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 SPAG17Q6Q759 2223 aa9.07□□□□□ -0.96
ITGB1-217ENST00000494395 SYNJ2BP-COX16A0A087WUM0 186 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 SIGLEC16A6NMB1 481 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 CBFA2T2O43439 604 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 PAGE1O75459 146 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 KLF8O95600 359 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-217ENST00000494395 F9P00740 461 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 PLEKP08567 350 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-217ENST00000494395 GZMAP12544 262 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 TNFAIP3P21580 790 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 CASP14P31944 242 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 RFC1P35251 1148 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-217ENST00000494395 FNTBP49356 437 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 IRAK1P51617 712 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 NRLP54845 237 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 DEUP1Q05D60 604 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 CBLBQ13191 982 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 NME3Q13232 169 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 MTA1Q13330 715 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 C15orf59Q2T9L4 293 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-217ENST00000494395 SH3PXD2AQ5TCZ1 1133 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 SPECC1LQ69YQ0 1117 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 PLEKHA7Q6IQ23 1121 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 FBXL22Q6P050 247 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 WDR59Q6PJI9 974 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 ZC3H14Q6PJT7 736 aaKnown RBP9.06□□□□□ -0.96
ITGB1-217ENST00000494395 ANKS1BQ7Z6G8 1248 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 PHLDB2Q86SQ0 1253 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 ADIPOR2Q86V24 386 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 CHSY1Q86X52 802 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 DNAAF5Q86Y56 855 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 VSTM4Q8IW00 320 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 LGI2Q8N0V4 545 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 CCDC33Q8N5R6 958 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 CAMKK1Q8N5S9 505 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 SUMF1Q8NBK3 374 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 TXNDC5Q8NBS9 432 aaKnown RBP9.06□□□□□ -0.96
ITGB1-217ENST00000494395 HJURPQ8NCD3 748 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-217ENST00000494395 FIBINQ8TAL6 211 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 RXFP2Q8WXD0 754 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 ITPKCQ96DU7 683 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 FAM122AQ96E09 287 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 VCPIP1Q96JH7 1222 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 HHIPQ96QV1 700 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 ACOX2Q99424 681 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 GABRG3Q99928 467 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 DDX50Q9BQ39 737 aaKnown RBP9.06□□□□□ -0.96
ITGB1-217ENST00000494395 ISCUQ9H1K1 167 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 SEPT11Q9NVA2 429 aaKnown RBP9.06□□□□□ -0.96
ITGB1-217ENST00000494395 TMEM51Q9NW97 253 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 COX16Q9P0S2 106 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 ARHGAP20Q9P2F6 1191 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 THAP10Q9P2Z0 257 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-217ENST00000494395 EBF1Q9UH73 591 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 GGA2Q9UJY4 613 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 INTS6Q9UL03 887 aaKnown RBP9.06□□□□□ -0.96
ITGB1-217ENST00000494395 NENFQ9UMX5 172 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 LUC7L2Q9Y383 392 aaKnown RBP9.06□□□□□ -0.96
ITGB1-217ENST00000494395 HS3ST4Q9Y661 456 aa9.06□□□□□ -0.96
ITGB1-217ENST00000494395 IGLV3-10A0A075B6K4 115 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 A0A1W2PQF6 199 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 PRR23AA6NEV1 266 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 SERPING1P05155 500 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 PABPC1P11940 636 aaKnown RBP9.05□□□□□ -0.96
ITGB1-217ENST00000494395 KRT3P12035 628 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 PDGFRAP16234 1089 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms