RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 PRKCHP24723 683 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 ERFP50548 548 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 SEMA3BQ13214 749 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 UNC5AQ6ZN44 842 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 SLC26A11Q86WA9 606 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 LRRC6Q86X45 466 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 MPP5Q8N3R9 675 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 PPM1NQ8N819 430 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 TTC17Q96AE7 1141 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 SLC7A6OSQ96CW6 309 aaPredicted RBP14.14□□□□□ -0.15
VCP-207ENST00000493886 UROC1Q96N76 676 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 RAB3IPQ96QF0 476 aaPredicted RBP14.14□□□□□ -0.15
VCP-207ENST00000493886 EBNA1BP2Q99848 306 aaKnown RBP14.14□□□□□ -0.15
VCP-207ENST00000493886 FERMT1Q9BQL6 677 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 LRMDAQ9H2I8 198 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 OPHN1O60890 802 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 ITGB1P05556 798 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 ERCC2P18074 760 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 YY1P25490 414 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 TPI1P60174 286 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 SP3Q02447 781 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 OVOS1Q6IE37 1185 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 ZNF598Q86UK7 904 aaKnown RBP14.14□□□□□ -0.15
VCP-207ENST00000493886 TP53INP2Q8IXH6 220 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 RBM12BQ8IXT5 1001 aaKnown RBP14.14□□□□□ -0.15
VCP-207ENST00000493886 OR10T2Q8NGX3 314 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 TMEM209Q96SK2 561 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 PKMYT1Q99640 499 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 COLEC11Q9BWP8 271 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 DMAP1Q9NPF5 467 aaPredicted RBP14.14□□□□□ -0.15
VCP-207ENST00000493886 FBXO6Q9NRD1 293 aaPredicted RBP14.14□□□□□ -0.15
VCP-207ENST00000493886 SEPT10Q9P0V9 454 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 CXorf49A8MYA2 514 aaPredicted RBP14.14□□□□□ -0.15
VCP-207ENST00000493886 DCTN3O75935 186 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 F9P00740 461 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 CDK16Q00536 496 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 ARL13BQ3SXY8 428 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 PM20D1Q6GTS8 502 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 RNF180Q86T96 592 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 LRRTM3Q86VH5 581 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 IRGQQ8WZA9 623 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 SERAC1Q96JX3 654 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 CEP41Q9BYV8 373 aa14.14□□□□□ -0.15
VCP-207ENST00000493886 TM9SF1O15321 606 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 FAM155BO75949 473 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 CABYRO75952 493 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 ACLYP53396 1101 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 WASHC5Q12768 1159 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 TAF11Q15544 211 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 FYB2Q5VWT5 728 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 BSPRYQ5W0U4 402 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 GSDMBQ8TAX9 411 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 C17orf50Q8WW18 174 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 SUSD3Q96L08 255 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 FAM111AQ96PZ2 611 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 NUDCD1Q96RS6 583 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 TRIM56Q9BRZ2 755 aaKnown RBP14.13□□□□□ -0.15
VCP-207ENST00000493886 SMYD2Q9NRG4 433 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 SQORQ9Y6N5 450 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 THSD7BQ9C0I4 1608 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 F8W810 466 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 PEX11AO75192 247 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 SKIV2L2P42285 1042 aaKnown RBP14.13□□□□□ -0.15
VCP-207ENST00000493886 HCAR3P49019 387 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 TTC39BQ5VTQ0 682 aaPredicted RBP14.13□□□□□ -0.15
VCP-207ENST00000493886 RFWD3Q6PCD5 774 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 DCLRE1AQ6PJP8 1040 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 PDZD4Q76G19 769 aaPredicted RBP14.13□□□□□ -0.15
VCP-207ENST00000493886 THEM5Q8N1Q8 247 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 PDCD7Q8N8D1 485 aaKnown RBP14.13□□□□□ -0.15
VCP-207ENST00000493886 WDCPQ9H6R7 721 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 ZNF180Q9UJW8 692 aa14.13□□□□□ -0.15
VCP-207ENST00000493886 ATP6V1G1O75348 118 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 MLNP12872 115 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 ZNF24P17028 368 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 CXCR3P49682 368 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 SLC18A2Q05940 514 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 ZNF567Q8N184 647 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 MMADHCQ9H3L0 296 aaPredicted RBP14.12□□□□□ -0.15
VCP-207ENST00000493886 EIF2B3Q9NR50 452 aaKnown RBP14.12□□□□□ -0.15
VCP-207ENST00000493886 KANSL3Q9P2N6 904 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 PCDHA11Q9Y5I1 949 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 TRIM49D1C9J1S8 452 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 LPXNO60711 386 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 AOC2O75106 756 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 PSMB4P28070 264 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 TSPY1Q01534 308 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 MAPRE1Q15691 268 aaKnown RBP14.12□□□□□ -0.15
VCP-207ENST00000493886 PARP6Q2NL67 630 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 TRMT10BQ6PF06 316 aaKnown RBP14.12□□□□□ -0.15
VCP-207ENST00000493886 SH2D5Q6ZV89 423 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 TTC7BQ86TV6 843 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 TAC4Q86UU9 113 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 SCML4Q8N228 414 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 TKTL2Q9H0I9 626 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 ZCWPW1Q9H0M4 648 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 RAD54BQ9Y620 910 aa14.12□□□□□ -0.15
VCP-207ENST00000493886 ARHGEF37A1IGU5 675 aa14.11□□□□□ -0.15
VCP-207ENST00000493886 INPPL1O15357 1258 aa14.11□□□□□ -0.15
VCP-207ENST00000493886 KRT37O76014 449 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms