RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ACADSBP45954 432 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 MAP2K3P46734 347 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 IFNAR2P48551 515 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 VAV2P52735 878 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 IFRD2Q12894 506 aaPredicted RBP12.66□□□□□ -0.38
UPF3A-210ENST00000493727 SF3A2Q15428 464 aaKnown RBP12.66□□□□□ -0.38
UPF3A-210ENST00000493727 PTPN20Q4JDL3 420 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 SDHAF4Q5VUM1 108 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 IL31Q6EBC2 164 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 PKN3Q6P5Z2 889 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 PIGZQ86VD9 579 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 DNAAF5Q86Y56 855 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 ZSCAN1Q8NBB4 408 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 SLC35F5Q8WV83 523 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 LOXL4Q96JB6 756 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 HSFY1Q96LI6 401 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 SMOQ99835 787 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 TRPC7Q9HCX4 862 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 DUS2Q9NX74 493 aaKnown RBP12.66□□□□□ -0.38
UPF3A-210ENST00000493727 STRIP2Q9ULQ0 834 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 ANKRD62A6NC57 917 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 E5RJQ4 531 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 BEST1O76090 585 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 MYBL1P10243 752 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 MMP8P22894 467 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 PPP3CCP48454 512 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 CACNA2D1P54289 1103 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 GALCP54803 685 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 ADIGQ0VDE8 80 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 ZNF77Q15935 545 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 AASDHQ4L235 1098 aaPredicted RBP12.65□□□□□ -0.38
UPF3A-210ENST00000493727 TRIM68Q6AZZ1 485 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 OR6B2Q6IFH4 312 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 FSTL4Q6MZW2 842 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 PMF1Q6P1K2 205 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 DNAJC24Q6P3W2 148 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 DENND5BQ6ZUT9 1274 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 MON1BQ7L1V2 547 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 PHLDB2Q86SQ0 1253 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 PHF13Q86YI8 300 aaPredicted RBP12.65□□□□□ -0.38
UPF3A-210ENST00000493727 MCOLN2Q8IZK6 566 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 WDTC1Q8N5D0 677 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 CAMKK1Q8N5S9 505 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 KIAA1958Q8N8K9 716 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 STKLD1Q8NE28 680 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 OSCP1Q8WVF1 389 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 GAB3Q8WWW8 586 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 C18orf8Q96DM3 657 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 CHFRQ96EP1 664 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 IFT43Q96FT9 208 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 C8orf48Q96LL4 319 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 CPXM1Q96SM3 734 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 KCNK16Q96T55 309 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 P2RY13Q9BPV8 354 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 PACSIN1Q9BY11 444 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 TSGA10Q9BZW7 698 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 ISCUQ9H1K1 167 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 ARRDC1-AS1Q9H2J1 176 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 ECT2Q9H8V3 914 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 CSNK1G1Q9HCP0 422 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 PNPLA8Q9NP80 782 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 MYO1AQ9UBC5 1043 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 CYTH4Q9UIA0 394 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 NENFQ9UMX5 172 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 PPP2R2CQ9Y2T4 447 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 ABCA7Q8IZY2 2146 aa12.65□□□□□ -0.38
UPF3A-210ENST00000493727 LAMA5O15230 3695 aa12.65□□□□□ -0.39
UPF3A-210ENST00000493727 MYO18AQ92614 2054 aaKnown RBP12.65□□□□□ -0.39
UPF3A-210ENST00000493727 ASCC3Q8N3C0 2202 aaKnown RBP12.64□□□□□ -0.39
UPF3A-210ENST00000493727 GOLGA8SH3BPF8 625 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 ERBB2P04626 1255 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 TMEM253P0C7T8 217 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 BMP4P12644 408 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 ARSAP15289 507 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 HDCP19113 662 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 SLC5A3P53794 718 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 KIF5AQ12840 1032 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 CCDC6Q16204 474 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 C2CD6Q53TS8 623 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 ZMIZ2Q8NF64 920 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 KCTD13Q8WZ19 329 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 ACDQ96AP0 544 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 VCPIP1Q96JH7 1222 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 UBXN6Q9BZV1 441 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 THAP2Q9H0W7 228 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 TRPM5Q9NZQ8 1165 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 WDR35Q9P2L0 1181 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 CNOT8Q9UFF9 292 aaKnown RBP12.64□□□□□ -0.39
UPF3A-210ENST00000493727 RALYQ9UKM9 306 aaKnown RBP12.64□□□□□ -0.39
UPF3A-210ENST00000493727 INTUQ9ULD6 942 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 ARHGAP26Q9UNA1 814 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 ZKSCAN5Q9Y2L8 839 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 REXO2Q9Y3B8 237 aaKnown RBP12.64□□□□□ -0.39
UPF3A-210ENST00000493727 SCINQ9Y6U3 715 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 MYOFQ9NZM1 2061 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 DMXL2Q8TDJ6 3036 aa12.64□□□□□ -0.39
UPF3A-210ENST00000493727 CACNA1EQ15878 2313 aa12.63□□□□□ -0.39
UPF3A-210ENST00000493727 OTOL1A6NHN0 477 aaPredicted RBP12.63□□□□□ -0.39
UPF3A-210ENST00000493727 RPP40O75818 363 aaKnown RBP12.63□□□□□ -0.39
UPF3A-210ENST00000493727 FBXO21O94952 628 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms