RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 TWNKQ96RR1 684 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 CRAMP1Q96RY5 1269 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 QTRT1Q9BXR0 403 aaKnown RBP6.48□□□□□ -1.37
SMG7-208ENST00000493609 NOD2Q9HC29 1040 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 C9orf78Q9NZ63 289 aaPredicted RBP6.48□□□□□ -1.37
SMG7-208ENST00000493609 LRRFIP2Q9Y608 721 aaKnown RBP6.48□□□□□ -1.37
SMG7-208ENST00000493609 EMSYQ7Z589 1322 aa6.48□□□□□ -1.37
SMG7-208ENST00000493609 NPIPB13A6NJU9 1138 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 NPIPB5A8MRT5 1133 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 NPIPB4C9JG80 1138 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 DSCR3O14972 297 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 TUBB4AP04350 444 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 AKR1A1P14550 325 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 CPA1P15085 419 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 PNPLA4P41247 253 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 FOXF2Q12947 444 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 CTXN3Q4LDR2 81 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 MDGA2Q7Z553 956 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 VPS52Q8N1B4 723 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 ADAD1Q96M93 576 aaKnown RBP6.47□□□□□ -1.37
SMG7-208ENST00000493609 TLR8Q9NR97 1041 aaKnown RBP6.47□□□□□ -1.37
SMG7-208ENST00000493609 RASSF1Q9NS23 344 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 PTGFRNQ9P2B2 879 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 GTF2A1LQ9UNN4 478 aa6.47□□□□□ -1.37
SMG7-208ENST00000493609 PPP6CO00743 305 aa6.46□□□□□ -1.38
SMG7-208ENST00000493609 RPS6KB1P23443 525 aa6.46□□□□□ -1.38
SMG7-208ENST00000493609 ADPRHP54922 357 aa6.46□□□□□ -1.38
SMG7-208ENST00000493609 GPR162Q16538 588 aa6.46□□□□□ -1.38
SMG7-208ENST00000493609 ARL13AQ5H913 290 aaPredicted RBP6.46□□□□□ -1.38
SMG7-208ENST00000493609 MEX3CQ5U5Q3 659 aaKnown RBP6.46□□□□□ -1.38
SMG7-208ENST00000493609 MTFR2Q6P444 385 aa6.46□□□□□ -1.38
SMG7-208ENST00000493609 RTL10Q7L3V2 364 aa6.46□□□□□ -1.38
SMG7-208ENST00000493609 TMEM200AQ86VY9 491 aa6.46□□□□□ -1.38
SMG7-208ENST00000493609 GALNT16Q8N428 558 aa6.46□□□□□ -1.38
SMG7-208ENST00000493609 ENDOVQ8N8Q3 282 aaKnown RBP6.46□□□□□ -1.38
SMG7-208ENST00000493609 ARL14EPQ8N8R7 260 aaPredicted RBP6.46□□□□□ -1.38
SMG7-208ENST00000493609 MAELQ96JY0 434 aaKnown RBP6.46□□□□□ -1.38
SMG7-208ENST00000493609 TRIM31Q9BZY9 425 aa6.46□□□□□ -1.38
SMG7-208ENST00000493609 FBXO4Q9UKT5 387 aa6.46□□□□□ -1.38
SMG7-208ENST00000493609 SMIM35A0A1B0GVV1 85 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 SGPL1O95470 568 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 AGR2O95994 175 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 CNPP09543 421 aaKnown RBP6.45□□□□□ -1.38
SMG7-208ENST00000493609 AVPR2P30518 371 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 ARHGAP25P42331 645 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 CCR5P51681 352 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 UBE3AQ05086 875 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 ALKBH1Q13686 389 aaKnown RBP6.45□□□□□ -1.38
SMG7-208ENST00000493609 ANKRD1Q15327 319 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 SUPT20HL1Q3ZLR7 823 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 LIPMQ5VYY2 423 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 LVRNQ6Q4G3 990 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.45□□□□□ -1.38
SMG7-208ENST00000493609 ZFPM2Q8WW38 1151 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 IP6K1Q92551 441 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 STAMQ92783 540 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 KAT2BQ92831 832 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 USP13Q92995 863 aaPredicted RBP6.45□□□□□ -1.38
SMG7-208ENST00000493609 EIF2AK1Q9BQI3 630 aaKnown RBP6.45□□□□□ -1.38
SMG7-208ENST00000493609 TXNRD2Q9NNW7 524 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 SLC22A11Q9NSA0 550 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 THAP1Q9NVV9 213 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 FLRT1Q9NZU1 646 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 KLQ9UEF7 1012 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 SLC25A13Q9UJS0 675 aa6.45□□□□□ -1.38
SMG7-208ENST00000493609 VWA3AA6NCI4 1184 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 MCIDASD6RGH6 385 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 TP73O15350 636 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 PAX3P23760 479 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 CERS1P27544 350 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 EPHB2P29323 1055 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 THOC5Q13769 683 aaKnown RBP6.44□□□□□ -1.38
SMG7-208ENST00000493609 DLGAP5Q15398 846 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 RUNDC3AQ59EK9 446 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 EARS2Q5JPH6 523 aaKnown RBP6.44□□□□□ -1.38
SMG7-208ENST00000493609 CBWD5Q5RIA9 395 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 RNF144BQ7Z419 303 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 YTHDF3Q7Z739 585 aaKnown RBP6.44□□□□□ -1.38
SMG7-208ENST00000493609 ZNF575Q86XF7 245 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 SCN4BQ8IWT1 228 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 ANKRD44Q8N8A2 993 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 OR52N4Q8NGI2 321 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 FAM110DQ8TAY7 271 aaPredicted RBP6.44□□□□□ -1.38
SMG7-208ENST00000493609 REEP2Q9BRK0 252 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 SCNM1Q9BWG6 230 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 ACAD9Q9H845 621 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 MOV10Q9HCE1 1003 aaKnown RBP6.44□□□□□ -1.38
SMG7-208ENST00000493609 ARL15Q9NXU5 204 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 PKP3Q9Y446 797 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 SMARCA2P51531 1590 aa6.44□□□□□ -1.38
SMG7-208ENST00000493609 SAC3D1A6NKF1 404 aa6.43□□□□□ -1.38
SMG7-208ENST00000493609 CGB1A6NKQ9 187 aa6.43□□□□□ -1.38
SMG7-208ENST00000493609 C2CD4BA6NLJ0 364 aa6.43□□□□□ -1.38
SMG7-208ENST00000493609 KLK10O43240 276 aa6.43□□□□□ -1.38
SMG7-208ENST00000493609 PKMP14618 531 aaKnown RBP6.43□□□□□ -1.38
SMG7-208ENST00000493609 ATP5F1P24539 256 aaPredicted RBP6.43□□□□□ -1.38
SMG7-208ENST00000493609 ZBTB16Q05516 673 aa6.43□□□□□ -1.38
SMG7-208ENST00000493609 CHRNDQ07001 517 aa6.43□□□□□ -1.38
SMG7-208ENST00000493609 SRSF4Q08170 494 aaKnown RBP6.43□□□□□ -1.38
SMG7-208ENST00000493609 STIM1Q13586 685 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms