RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 AP4E1Q9UPM8 1137 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 PCDHA13Q9Y5I0 950 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 CACNA1IQ9P0X4 2223 aa8.38□□□□□ -1.07
TM4SF1-204ENST00000493348 COL4A3Q01955 1670 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 A0A0A0MRY4 1105 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 CHURC1-FNTBB4DL54 471 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 K7EQS6 105 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 FGF10O15520 208 aaPredicted RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 SPOPO43791 374 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 KRT7P08729 469 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 EPHB2P29323 1055 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 MIPP30301 263 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 NTSR1P30989 418 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 SGSHP51688 502 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 DGKEP52429 567 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 SCAPQ12770 1279 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 KIF5AQ12840 1032 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 EIF4EBP2Q13542 120 aaPredicted RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 ANGPT1Q15389 498 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 OTUD1Q5VV17 481 aaPredicted RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 MBLAC2Q68D91 279 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 NAIF1Q69YI7 327 aaPredicted RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 TRNP1Q6NT89 227 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 SERPINA13PQ6UXR4 307 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 Q6ZS52 159 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 TFAP2DQ7Z6R9 452 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 SETD3Q86TU7 594 aaPredicted RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 CIR1Q86X95 450 aaPredicted RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 PSTKQ8IV42 348 aaKnown RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 CCDC33Q8N5R6 958 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 ALLCQ8N6M5 410 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 CCDC185Q8N715 623 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 TXNDC5Q8NBS9 432 aaKnown RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 TSTD1Q8NFU3 115 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 SLC35G2Q8TBE7 412 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 ATRIPQ8WXE1 791 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 HSPH1Q92598 858 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 ATOH1Q92858 354 aaPredicted RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 ARHGEF26Q96DR7 871 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 PRICKLE1Q96MT3 831 aaPredicted RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 PRMT1Q99873 361 aaKnown RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 C2orf49Q9BVC5 232 aaPredicted RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 PACSIN1Q9BY11 444 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 FBRSL1Q9HCM7 1045 aaKnown RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 MPP6Q9NZW5 540 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 CALCOCO1Q9P1Z2 691 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 PPARGC1AQ9UBK2 798 aaKnown RBP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 SUN2Q9UH99 717 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 FBXO10Q9UK96 956 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 FBXO4Q9UKT5 387 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 MMP17Q9ULZ9 603 aa8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.37□□□□□ -1.07
TM4SF1-204ENST00000493348 ZNF318Q5VUA4 2279 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 H3BRJ5 948 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 GFRA2O00451 464 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 TRIM24O15164 1050 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 ARHGAP6O43182 974 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 RNASEH1O60930 286 aaKnown RBP8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 LRCH4O75427 683 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 PROSCO94903 275 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 APBB3O95704 486 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 EPHX1P07099 455 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 DLDP09622 509 aaKnown RBP8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 CISD3P0C7P0 127 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 ACADMP11310 421 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 TNNT1P13805 278 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 HOXB2P14652 356 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 RHOQP17081 205 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 HLA-FP30511 346 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 L1CAMP32004 1257 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 CD70P32970 193 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 CSKP41240 450 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 WASP42768 502 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 SLC1A1P43005 524 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 MAPKAPK2P49137 400 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 GEMIN4P57678 1058 aaKnown RBP8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 ECT2LQ008S8 904 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 OGDHQ02218 1023 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 NRG1Q02297 640 aaPredicted RBP8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 SFSWAPQ12872 951 aaKnown RBP8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 LMAN2Q12907 356 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 BYSLQ13895 437 aaKnown RBP8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 GSE1Q14687 1217 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 GEN1Q17RS7 908 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 SMTNL2Q2TAL5 461 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 GAB4Q2WGN9 574 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 PLEKHG6Q3KR16 790 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 ACCSLQ4AC99 568 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 PITRM1Q5JRX3 1037 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 EGFLAMQ63HQ2 1017 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 IL31Q6EBC2 164 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 ZNF783Q6ZMS7 281 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 SYT13Q7L8C5 426 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 BNIPLQ7Z465 357 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 C14orf80Q86SX3 495 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 CAMKK1Q8N5S9 505 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 NIPA2Q8N8Q9 360 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 KCTD6Q8NC69 237 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 OLIG1Q8TAK6 271 aa8.36□□□□□ -1.07
TM4SF1-204ENST00000493348 USP33Q8TEY7 942 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms