RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 BPGMP07738 259 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 PTPN4P29074 926 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 PDK1Q15118 436 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 TRIM68Q6AZZ1 485 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 LRRC8BQ6P9F7 803 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 CCDC91Q7Z6B0 441 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 POU5F2Q8N7G0 328 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 SPATA22Q8NHS9 363 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 GIMAP7Q8NHV1 300 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 FAM167BQ9BTA0 163 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 ATXN3LQ9H3M9 355 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 CHRAC1Q9NRG0 131 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 NOP53Q9NZM5 478 aaKnown RBP12.76□□□□□ -0.37
HMGN1-220ENST00000492280 TMEM216Q9P0N5 145 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 SIRPGQ9P1W8 387 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 DFFAO00273 331 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 MOCS2O96007 188 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-220ENST00000492280 LRPAP1P30533 357 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 KPNB1Q14974 876 aaKnown RBP12.76□□□□□ -0.37
HMGN1-220ENST00000492280 KHDC1Q4VXA5 237 aaKnown RBP12.76□□□□□ -0.37
HMGN1-220ENST00000492280 LGSNQ5TDP6 509 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 BHLHA9Q7RTU4 235 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 C10orf107Q8IVU9 208 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 LRRC39Q96DD0 335 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 EBF2Q9HAK2 575 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 NDFIP2Q9NV92 336 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 SFMBT1Q9UHJ3 866 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 DNAJC16Q9Y2G8 782 aa12.76□□□□□ -0.37
HMGN1-220ENST00000492280 HBS1LQ9Y450 684 aaKnown RBP12.76□□□□□ -0.37
HMGN1-220ENST00000492280 PPP1R12AO14974 1030 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-220ENST00000492280 GYG2O15488 501 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 OPHN1O60890 802 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 KRT36O76013 467 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 MT-CYBP00156 380 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-220ENST00000492280 JCHAINP01591 159 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 PRKCGP05129 697 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 ESRRAP11474 423 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-220ENST00000492280 PGAM1P18669 254 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 THPOP40225 353 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 CCR10P46092 362 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 LRRTM3Q86VH5 581 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 OR10T2Q8NGX3 314 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 COLEC11Q9BWP8 271 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 PNPOQ9NVS9 261 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 TAS2R1Q9NYW7 299 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 CPSF2Q9P2I0 782 aaKnown RBP12.75□□□□□ -0.37
HMGN1-220ENST00000492280 OR12D3Q9UGF7 316 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 MYLKQ15746 1914 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 PRR5-ARHGAP8B1AHC4 643 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 M0QZ92 97 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 DNAJC6O75061 913 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 STK10O94804 968 aaKnown RBP12.75□□□□□ -0.37
HMGN1-220ENST00000492280 CD1EP15812 388 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 CCND1P24385 295 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 TYK2P29597 1187 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 FDFT1P37268 417 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 AVPR1AP37288 418 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 ARHGAP8P85298 464 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 DCLK2Q8N568 766 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 SLC25A41Q8N5S1 370 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 INPP5DQ92835 1189 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 CERS2Q96G23 380 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 FRMD8Q9BZ67 464 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-220ENST00000492280 FAM124BQ9H5Z6 455 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-220ENST00000492280 NMRK2Q9NPI5 230 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 TXNDC16Q9P2K2 825 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 GTF2IRD1Q9UHL9 959 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 VANGL2Q9ULK5 521 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 HHLA1C9JL84 531 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 B4GALT3O60512 393 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 FGF3P11487 239 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-220ENST00000492280 CRHR1P34998 444 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 GLUD2P49448 558 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 SARNPP82979 210 aaKnown RBP12.75□□□□□ -0.37
HMGN1-220ENST00000492280 CDC42EP1Q00587 391 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 STX3Q13277 289 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 ITGA9Q13797 1035 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 ZNF460Q14592 562 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 PCLAFQ15004 111 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 BNIPLQ7Z465 357 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 STRA8Q7Z7C7 330 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 SPATA6LQ8N4H0 392 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 MAGEC3Q8TD91 643 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 NSL1Q96IY1 281 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 WDCPQ9H6R7 721 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 GABRQQ9UN88 632 aa12.75□□□□□ -0.37
HMGN1-220ENST00000492280 TDRD15B5MCY1 1934 aaKnown RBP12.74□□□□□ -0.37
HMGN1-220ENST00000492280 SCN10AQ9Y5Y9 1956 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 FKBP1BP68106 108 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 NOMO2Q5JPE7 1267 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 STEAP4Q687X5 459 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 MARK2Q7KZI7 788 aaKnown RBP12.74□□□□□ -0.37
HMGN1-220ENST00000492280 ARCQ7LC44 396 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 CRLF3Q8IUI8 442 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 EFCAB3Q8N7B9 438 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 GPR152Q8TDT2 470 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 MCUR1Q96AQ8 359 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 RNPEPL1Q9HAU8 725 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 MAN1C1Q9NR34 630 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 SNX15Q9NRS6 342 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms