RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PIGVQ9NUD9 493 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 ERVW-1Q9UQF0 538 aa32.38■■■□□ 2.77
LDB1-204ENST00000490751 A0A1B0GVM2 712 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 TCAF2A6NFQ2 919 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 C7P10643 843 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 TFE3P19532 575 aaPredicted RBP32.37■■■□□ 2.77
LDB1-204ENST00000490751 GGCXP38435 758 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 JAM2P57087 298 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 CENPCQ03188 943 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 GFPT1Q06210 699 aaPredicted RBP32.37■■■□□ 2.77
LDB1-204ENST00000490751 AUHQ13825 339 aaKnown RBP32.37■■■□□ 2.77
LDB1-204ENST00000490751 SYCP1Q15431 976 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 UAP1L1Q3KQV9 507 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 ZNF677Q86XU0 584 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 CADM4Q8NFZ8 388 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 CPA5Q8WXQ8 436 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 IGSF8Q969P0 613 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 SUSD2Q9UGT4 822 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 VANGL2Q9ULK5 521 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 HS3ST4Q9Y661 456 aa32.37■■■□□ 2.77
LDB1-204ENST00000490751 NYNRINQ9P2P1 1898 aaKnown RBP32.36■■■□□ 2.77
LDB1-204ENST00000490751 LGALS16A8MUM7 142 aa32.36■■■□□ 2.77
LDB1-204ENST00000490751 GOLGA8SH3BPF8 625 aa32.36■■■□□ 2.77
LDB1-204ENST00000490751 PAGE1O75459 146 aa32.36■■■□□ 2.77
LDB1-204ENST00000490751 KCNK5O95279 499 aa32.36■■■□□ 2.77
LDB1-204ENST00000490751 SRPRAP08240 638 aaKnown RBP32.36■■■□□ 2.77
LDB1-204ENST00000490751 PDGFRAP16234 1089 aa32.36■■■□□ 2.77
LDB1-204ENST00000490751 SOX5P35711 763 aa32.36■■■□□ 2.77
LDB1-204ENST00000490751 HNRNPA1L2Q32P51 320 aaKnown RBP32.36■■■□□ 2.77
LDB1-204ENST00000490751 KDM1BQ8NB78 822 aa32.36■■■□□ 2.77
LDB1-204ENST00000490751 PCMTD1Q96MG8 357 aaPredicted RBP32.36■■■□□ 2.77
LDB1-204ENST00000490751 SPAG5Q96R06 1193 aa32.36■■■□□ 2.77
LDB1-204ENST00000490751 TMEM63CQ9P1W3 806 aa32.36■■■□□ 2.77
LDB1-204ENST00000490751 DAAM1Q9Y4D1 1078 aa32.36■■■□□ 2.77
LDB1-204ENST00000490751 SIN3BO75182 1162 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 DNTTP04053 509 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 NUMBP49757 651 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 IRAK1P51617 712 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 ATXN3P54252 364 aaPredicted RBP32.35■■■□□ 2.77
LDB1-204ENST00000490751 ECT2LQ008S8 904 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 CDR2Q01850 454 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 ZBTB16Q05516 673 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 SLC12A1Q13621 1099 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 NCAPHQ15003 741 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 DCAF12L1Q5VU92 463 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 ZNF776Q68DI1 518 aaPredicted RBP32.35■■■□□ 2.77
LDB1-204ENST00000490751 DHX40Q8IX18 779 aaKnown RBP32.35■■■□□ 2.77
LDB1-204ENST00000490751 DNASE2BQ8WZ79 361 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 NT5C3BQ969T7 300 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 TBCBQ99426 244 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 GTPBP2Q9BX10 602 aaKnown RBP32.35■■■□□ 2.77
LDB1-204ENST00000490751 WDCPQ9H6R7 721 aa32.35■■■□□ 2.77
LDB1-204ENST00000490751 GNSP15586 552 aa32.34■■■□□ 2.77
LDB1-204ENST00000490751 ZNF18P17022 549 aa32.34■■■□□ 2.77
LDB1-204ENST00000490751 CDK11BP21127 795 aaKnown RBP32.34■■■□□ 2.77
LDB1-204ENST00000490751 MZF1P28698 734 aaPredicted RBP32.34■■■□□ 2.77
LDB1-204ENST00000490751 FLT3P36888 993 aa32.34■■■□□ 2.77
LDB1-204ENST00000490751 CXCR3P49682 368 aa32.34■■■□□ 2.77
LDB1-204ENST00000490751 DEUP1Q05D60 604 aa32.34■■■□□ 2.77
LDB1-204ENST00000490751 TYRO3Q06418 890 aa32.34■■■□□ 2.77
LDB1-204ENST00000490751 NUMA1Q14980 2115 aa32.34■■■□□ 2.77
LDB1-204ENST00000490751 BRMS1LQ5PSV4 323 aa32.34■■■□□ 2.77
LDB1-204ENST00000490751 RNF219Q5W0B1 726 aaPredicted RBP32.34■■■□□ 2.77
LDB1-204ENST00000490751 CXorf57Q6NSI4 855 aaKnown RBP32.34■■■□□ 2.77
LDB1-204ENST00000490751 SND1Q7KZF4 910 aaKnown RBP eCLIP32.34■■■□□ 2.77
LDB1-204ENST00000490751 PGAP3Q96FM1 320 aaPredicted RBP32.34■■■□□ 2.77
LDB1-204ENST00000490751 TKTL2Q9H0I9 626 aa32.34■■■□□ 2.77
LDB1-204ENST00000490751 SIK2Q9H0K1 926 aa32.34■■■□□ 2.77
LDB1-204ENST00000490751 RSPH9Q9H1X1 276 aaPredicted RBP32.34■■■□□ 2.77
LDB1-204ENST00000490751 ARHGEF38Q9NXL2 777 aa32.34■■■□□ 2.77
LDB1-204ENST00000490751 ITIH6Q6UXX5 1313 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 METTL12A8MUP2 240 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 TTC34A8MYJ7 566 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 ADCY5O95622 1261 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 ACSL1P33121 698 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 STAT1P42224 750 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 FMO1Q01740 532 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 ARID5BQ14865 1188 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 SLC25A52Q3SY17 297 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 TTC31Q49AM3 519 aaPredicted RBP32.33■■■□□ 2.77
LDB1-204ENST00000490751 PSAPL1Q6NUJ1 521 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 C14orf80Q86SX3 495 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 AOPEPQ8N6M6 819 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 NEK11Q8NG66 645 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 RPL10LQ96L21 214 aaKnown RBP32.33■■■□□ 2.77
LDB1-204ENST00000490751 HSD3B7Q9H2F3 369 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 ANLNQ9NQW6 1124 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 SLCO3A1Q9UIG8 710 aa32.33■■■□□ 2.77
LDB1-204ENST00000490751 ASCC3Q8N3C0 2202 aaKnown RBP32.32■■■□□ 2.77
LDB1-204ENST00000490751 CYP1A1P04798 512 aaPredicted RBP32.32■■■□□ 2.76
LDB1-204ENST00000490751 CHRNB2P17787 502 aa32.32■■■□□ 2.76
LDB1-204ENST00000490751 NOVA1P51513 510 aaKnown RBP32.32■■■□□ 2.76
LDB1-204ENST00000490751 OXCT1P55809 520 aa32.32■■■□□ 2.76
LDB1-204ENST00000490751 UBXN1Q04323 297 aa32.32■■■□□ 2.76
LDB1-204ENST00000490751 N4BP2L1Q5TBK1 243 aaPredicted RBP32.32■■■□□ 2.76
LDB1-204ENST00000490751 TRNP1Q6NT89 227 aa32.32■■■□□ 2.76
LDB1-204ENST00000490751 MIR1-1HGQ9H1L0 117 aa32.32■■■□□ 2.76
LDB1-204ENST00000490751 TMEM59LQ9UK28 342 aa32.32■■■□□ 2.76
LDB1-204ENST00000490751 PAXBP1Q9Y5B6 917 aa32.32■■■□□ 2.76
LDB1-204ENST00000490751 I6L893 689 aaPredicted RBP32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms