RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 MUC22E2RYF6 1773 aaPredicted RBP11.22□□□□□ -0.61
TFF3-203ENST00000489676 KCNK3O14649 394 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 ZNF500O60304 480 aaPredicted RBP11.22□□□□□ -0.61
TFF3-203ENST00000489676 TBL1XO60907 577 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 SRGAP2O75044 1071 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 LUC7L3O95232 432 aaKnown RBP11.22□□□□□ -0.61
TFF3-203ENST00000489676 ADH1CP00326 375 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 F5P12259 2224 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 ERCC2P18074 760 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 MAPKAPK2P49137 400 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 CDH4P55283 916 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 ADCY2Q08462 1091 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 ZNF211Q13398 564 aaPredicted RBP11.22□□□□□ -0.61
TFF3-203ENST00000489676 TDGQ13569 410 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 RUNX3Q13761 415 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 ANKRD20A8PQ5CZ79 823 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 NCBP2-AS2Q69YL0 99 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 RWDD4Q6NW29 188 aaKnown RBP11.22□□□□□ -0.61
TFF3-203ENST00000489676 SYT10Q6XYQ8 523 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 TFAP2DQ7Z6R9 452 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 C12orf40Q86WS4 652 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 MAP7D3Q8IWC1 876 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 RASGEF1CQ8N431 466 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 CPA6Q8N4T0 437 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 NPWQ8N729 165 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 PLD5Q8N7P1 536 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 OR52K2Q8NGK3 314 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 BHMTQ93088 406 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 TMA16Q96EY4 203 aaKnown RBP11.22□□□□□ -0.61
TFF3-203ENST00000489676 LMLNQ96KR4 655 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 OSBPL9Q96SU4 736 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 PSMB7Q99436 277 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 BBS2Q9BXC9 721 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 OSBPL8Q9BZF1 889 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 RETREG1Q9H6L5 497 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 NOL6Q9H6R4 1146 aaKnown RBP11.22□□□□□ -0.61
TFF3-203ENST00000489676 BRD9Q9H8M2 597 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 SLC2A4RGQ9NR83 387 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 NDFIP2Q9NV92 336 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 PLK2Q9NYY3 685 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 NYNRINQ9P2P1 1898 aaKnown RBP11.22□□□□□ -0.61
TFF3-203ENST00000489676 CLEC4EQ9ULY5 219 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 DUSP12Q9UNI6 340 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 EFR3BQ9Y2G0 817 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 TBC1D30Q9Y2I9 924 aa11.22□□□□□ -0.61
TFF3-203ENST00000489676 MIA3Q5JRA6 1907 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 CTAGE9A4FU28 777 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 SHISA7A6NL88 538 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 NEDD8-MDP1E9PL57 170 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 CES2O00748 559 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 NARSO43776 548 aaKnown RBP11.21□□□□□ -0.61
TFF3-203ENST00000489676 MFSD11O43934 449 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 CLDN11O75508 207 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 CYBBP04839 570 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 SRFP11831 508 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 KRT10P13645 584 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 TYRP14679 529 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 AMPD1P23109 780 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 GAD2Q05329 585 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 MESP2Q0VG99 397 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 KLF1Q13351 362 aaPredicted RBP11.21□□□□□ -0.61
TFF3-203ENST00000489676 PAFAH1B3Q15102 231 aaKnown RBP11.21□□□□□ -0.61
TFF3-203ENST00000489676 ITPRIPL2Q3MIP1 535 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 ZFYVE27Q5T4F4 411 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 AFMIDQ63HM1 303 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
TFF3-203ENST00000489676 BBS12Q6ZW61 710 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 ARHGAP12Q8IWW6 846 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 UMODL1-AS1Q8N2C9 162 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 PHTF2Q8N3S3 785 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.21□□□□□ -0.61
TFF3-203ENST00000489676 DDI1Q8WTU0 396 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 COG1Q8WTW3 980 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 CATSPERBQ9H7T0 1116 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 CD320Q9NPF0 282 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 DNAI1Q9UI46 699 aa11.21□□□□□ -0.61
TFF3-203ENST00000489676 TYW5A2RUC4 315 aaKnown RBP11.2□□□□□ -0.62
TFF3-203ENST00000489676 KIF2AO00139 706 aaPredicted RBP11.2□□□□□ -0.62
TFF3-203ENST00000489676 TUBB4AP04350 444 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 PRLRP16471 622 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 TCP1P17987 556 aaKnown RBP11.2□□□□□ -0.62
TFF3-203ENST00000489676 HOXD11P31277 338 aaPredicted RBP11.2□□□□□ -0.62
TFF3-203ENST00000489676 CXCR5P32302 372 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 GJA4P35212 333 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 OPRD1P41143 372 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 EIF2DP41214 584 aaKnown RBP11.2□□□□□ -0.62
TFF3-203ENST00000489676 LLGL1Q15334 1064 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 SIX1Q15475 284 aaPredicted RBP11.2□□□□□ -0.62
TFF3-203ENST00000489676 ANO4Q32M45 955 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 FSCBQ5H9T9 825 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 IER5LQ5T953 404 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 NAIF1Q69YI7 327 aaPredicted RBP11.2□□□□□ -0.62
TFF3-203ENST00000489676 KIAA0907Q7Z7F0 614 aaPredicted RBP11.2□□□□□ -0.62
TFF3-203ENST00000489676 SETD3Q86TU7 594 aaPredicted RBP11.2□□□□□ -0.62
TFF3-203ENST00000489676 RNF135Q8IUD6 432 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 CCDC50Q8IVM0 306 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 MFN1Q8IWA4 741 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 FIBINQ8TAL6 211 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 ALG14Q96F25 216 aa11.2□□□□□ -0.62
TFF3-203ENST00000489676 SLC2A11Q9BYW1 496 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms