RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 GALNT11Q8NCW6 608 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 HEXIM2Q96MH2 286 aaKnown RBP12.01□□□□□ -0.49
HDAC6-233ENST00000489352 KRT82Q9NSB4 513 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDAC6-233ENST00000489352 OSER1Q9NX31 292 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 ARHGAP20Q9P2F6 1191 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 CYTH4Q9UIA0 394 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 NAGPAQ9UK23 515 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 EXOC7Q9UPT5 735 aa12.01□□□□□ -0.49
HDAC6-233ENST00000489352 A0A1W2PQH9 124 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 H3BM21 787 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 CTDNEP1O95476 244 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 IL1BP01584 269 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 PRKCGP05129 697 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 WT1P19544 449 aaPredicted RBP12□□□□□ -0.49
HDAC6-233ENST00000489352 SLC6A4P31645 630 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 PSEN1P49768 467 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 MAP3K7CLP57077 242 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 SEPT6Q14141 434 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 HNRNPA1L2Q32P51 320 aaKnown RBP12□□□□□ -0.49
HDAC6-233ENST00000489352 WDR72Q3MJ13 1102 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 TMEM164Q5U3C3 297 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 AADATQ8N5Z0 425 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 NAT6Q93015 286 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 ABHD17AQ96GS6 310 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 TNIP3Q96KP6 325 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 IL12RB2Q99665 862 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 MYOCQ99972 504 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 SLC12A9Q9BXP2 914 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 INTS13Q9NVM9 706 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 STRIP2Q9ULQ0 834 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 SCML2Q9UQR0 700 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 CA5BQ9Y2D0 317 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 APCP25054 2843 aa12□□□□□ -0.49
HDAC6-233ENST00000489352 PRAMEF33A0A0G2JMD5 474 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 A0A1B0GTL3 188 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 A0A1W2PQ27 194 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 A0A1W2PQ64 194 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 A0A1W2PQC6 194 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 GOLGA8IPA6NC78 632 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 PRR19A6NJB7 356 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 GOLGA8JA6NMD2 632 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 PRAMEF10O60809 474 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 HOXD9P28356 352 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-233ENST00000489352 NOS2P35228 1153 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 ATP1A2P50993 1020 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 GUCY1B3Q02153 619 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 EFEMP1Q12805 493 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 ZNF542PQ5EBM4 170 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 BMP2KLQ5H9B9 411 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 PERM1Q5SV97 790 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 DYMQ7RTS9 669 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 C4orf32Q8N8J7 132 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 JAKMIP2Q96AA8 810 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 TMA16Q96EY4 203 aaKnown RBP11.99□□□□□ -0.49
HDAC6-233ENST00000489352 IFT43Q96FT9 208 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 GFM1Q96RP9 751 aaKnown RBP11.99□□□□□ -0.49
HDAC6-233ENST00000489352 CCDC3Q9BQI4 270 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 MMTAG2Q9BU76 263 aaKnown RBP11.99□□□□□ -0.49
HDAC6-233ENST00000489352 CASS4Q9NQ75 786 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 DONSONQ9NYP3 566 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 SALL4Q9UJQ4 1053 aa11.99□□□□□ -0.49
HDAC6-233ENST00000489352 HIVEP1P15822 2718 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 UNC13CQ8NB66 2214 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 TARSL2A2RTX5 802 aaKnown RBP11.98□□□□□ -0.49
HDAC6-233ENST00000489352 AGRPO00253 132 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 SLC31A1O15431 190 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 CD82P27701 267 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 ZNF131P52739 623 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 MAPK10P53779 464 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 FGL2Q14314 439 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 SURF1Q15526 300 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 DEFB133Q30KQ1 61 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 RSRC2Q7L4I2 434 aaKnown RBP11.98□□□□□ -0.49
HDAC6-233ENST00000489352 TRIM69Q86WT6 500 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 SYCP3Q8IZU3 236 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 IL22RA1Q8N6P7 574 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 JPH3Q8WXH2 748 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-233ENST00000489352 TMEM74Q96NL1 305 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 CGRRF1Q99675 332 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 FOXP3Q9BZS1 431 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 IKZF4Q9H2S9 585 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 NMUR1Q9HB89 426 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 PREBQ9HCU5 417 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 CEP83Q9Y592 693 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 NME7Q9Y5B8 376 aa11.98□□□□□ -0.49
HDAC6-233ENST00000489352 EDDM13A0A1B0GTR0 161 aa11.97□□□□□ -0.49
HDAC6-233ENST00000489352 TTLL8A6PVC2 850 aa11.97□□□□□ -0.49
HDAC6-233ENST00000489352 EFCAB7A8K855 629 aa11.97□□□□□ -0.49
HDAC6-233ENST00000489352 CNTN5O94779 1100 aa11.97□□□□□ -0.49
HDAC6-233ENST00000489352 CLDN1O95832 211 aa11.97□□□□□ -0.49
HDAC6-233ENST00000489352 ASLP04424 464 aa11.97□□□□□ -0.49
HDAC6-233ENST00000489352 TRIM21P19474 475 aaKnown RBP11.97□□□□□ -0.49
HDAC6-233ENST00000489352 AKT2P31751 481 aa11.97□□□□□ -0.49
HDAC6-233ENST00000489352 DDIT3P35638 169 aa11.97□□□□□ -0.49
HDAC6-233ENST00000489352 PDX1P52945 283 aa11.97□□□□□ -0.49
HDAC6-233ENST00000489352 ZNF445P59923 1031 aa11.97□□□□□ -0.49
HDAC6-233ENST00000489352 DRAP1Q14919 205 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-233ENST00000489352 BMT2Q1RMZ1 405 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms