RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 SMPD4Q9NXE4 827 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 HSFX1Q9UBD0 423 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 MSRB2Q9Y3D2 182 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 WNT6Q9Y6F9 365 aa6.27□□□□□ -1.41
CDHR3-213ENST00000488386 MYOFQ9NZM1 2061 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 FAM237AA0A1B0GTK4 181 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 A0A1W2PQ27 194 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 A0A1W2PQ64 194 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 A0A1W2PQD8 194 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 ZNF503-AS2A6NEH8 195 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 FADS2P1A8MWK0 482 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 PROB1E7EW31 1015 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 PDXKO00764 312 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 AURKAO14965 403 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 FGF10O15520 208 aaPredicted RBP6.26□□□□□ -1.41
CDHR3-213ENST00000488386 CALUO43852 315 aaPredicted RBP6.26□□□□□ -1.41
CDHR3-213ENST00000488386 PSPNO60542 156 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 RHOBTB3O94955 611 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 EGFP01133 1207 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 HLA-DRAP01903 254 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 CKMP06732 381 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 ITGAVP06756 1048 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 JUNBP17275 347 aaPredicted RBP6.26□□□□□ -1.41
CDHR3-213ENST00000488386 CD58P19256 250 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 NR2F2P24468 414 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 ANXA13P27216 316 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 ADORA2BP29275 332 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 PIK3CAP42336 1068 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 PXNP49023 591 aaPredicted RBP6.26□□□□□ -1.41
CDHR3-213ENST00000488386 PGFP49763 221 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 NDST1P52848 882 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 RPL10AP62906 217 aaKnown RBP6.26□□□□□ -1.41
CDHR3-213ENST00000488386 PPP3CAQ08209 521 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 SMARCB1Q12824 385 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 SERINC3Q13530 473 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 MTF1Q14872 753 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 CFAP221Q4G0U5 840 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 ARHGAP29Q52LW3 1261 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 ZNF667Q5HYK9 610 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 C4orf50Q6ZRC1 276 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 DENND5BQ6ZUT9 1274 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 PAQR9Q6ZVX9 377 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 MON1AQ86VX9 555 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 ZSWIM9Q86XI8 627 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 TRIM59Q8IWR1 403 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 KIAA2013Q8IYS2 634 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 CELF5Q8N6W0 485 aaKnown RBP6.26□□□□□ -1.41
CDHR3-213ENST00000488386 C12orf29Q8N999 325 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 B3GALNT2Q8NCR0 500 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 SCAMP5Q8TAC9 235 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 MYCBPAPQ8TBZ2 947 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 TAS1R2Q8TE23 839 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 BTN2A2Q8WVV5 523 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 WBP2Q969T9 261 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 SYAP1Q96A49 352 aaPredicted RBP6.26□□□□□ -1.41
CDHR3-213ENST00000488386 CLDN23Q96B33 292 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 CCDC120Q96HB5 630 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 PLCD4Q9BRC7 762 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 SCAND2PQ9GZW5 306 aaPredicted RBP6.26□□□□□ -1.41
CDHR3-213ENST00000488386 RNF38Q9H0F5 515 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 IRF2BPLQ9H1B7 796 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 LINC00597Q9H2U6 94 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 FBRSL1Q9HCM7 1045 aaKnown RBP6.26□□□□□ -1.41
CDHR3-213ENST00000488386 ZDHHC4Q9NPG8 344 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 TDP1Q9NUW8 608 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 GCNT4Q9P109 453 aa6.26□□□□□ -1.41
CDHR3-213ENST00000488386 CACNA1HO95180 2353 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 TRAV19A0A0A6YYK7 116 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 FITM1A5D6W6 292 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 BIN1O00499 593 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 MAN2B1O00754 1011 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 TACC1O75410 805 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 FGF19O95750 216 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 LMNAP02545 664 aaKnown RBP6.25□□□□□ -1.41
CDHR3-213ENST00000488386 NAT2P11245 290 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 TDGF1P13385 188 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 RAC2P15153 192 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 HDCP19113 662 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 PRCPP42785 496 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 MAGEA11P43364 429 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 FNTBP49356 437 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 VAMP7P51809 220 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 MAP3K7CLP57077 242 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 SNRPFP62306 86 aaKnown RBP6.25□□□□□ -1.41
CDHR3-213ENST00000488386 AMPD2Q01433 879 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 POU4F1Q01851 419 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 TAF10Q12962 218 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 ADAM9Q13443 819 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 RUNX3Q13761 415 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 BECN1Q14457 450 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 KCNB1Q14721 858 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 ZNF77Q15935 545 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 KCNMB1Q16558 191 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 ITPRIPL2Q3MIP1 535 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 ZACNQ401N2 412 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 HSF5Q4G112 596 aaPredicted RBP6.25□□□□□ -1.41
CDHR3-213ENST00000488386 GTF2IRD2BQ6EKJ0 949 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 FSTL4Q6MZW2 842 aa6.25□□□□□ -1.41
CDHR3-213ENST00000488386 CC2D1AQ6P1N0 951 aaPredicted RBP6.25□□□□□ -1.41
CDHR3-213ENST00000488386 CEP128Q6ZU80 1094 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms