RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 F8VP50 259 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 LINC00271P0C7V0 271 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 ZCCHC18P0CG32 403 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 CA4P22748 312 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 GRIK1P39086 918 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 RAP1GDS1P52306 607 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 KRT72Q14CN4 511 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 SDHAF4Q5VUM1 108 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 RINLQ6ZS11 566 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 SPRED2Q7Z698 418 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 SCN4BQ8IWT1 228 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 RNF168Q8IYW5 571 aaPredicted RBP14.1□□□□□ -0.15
COPS7B-221ENST00000488111 TTC9BQ8N6N2 239 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 RFWD2Q8NHY2 731 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 MCUR1Q96AQ8 359 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 OLFM3Q96PB7 478 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 LRRC4Q9HBW1 653 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 G3BP2Q9UN86 482 aaKnown RBP14.1□□□□□ -0.15
COPS7B-221ENST00000488111 USTQ9Y2C2 406 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 SLC27A5Q9Y2P5 690 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 PCDHB12Q9Y5F1 795 aa14.1□□□□□ -0.15
COPS7B-221ENST00000488111 OR6C75A6NL08 312 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 TBC1D4O60343 1298 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 SOD2P04179 222 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 GPR15P49685 360 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 ZNF252P-AS1Q0IIN9 211 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 SHHQ15465 462 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 PSMD5Q16401 504 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 IZUMO3Q5VZ72 239 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 OLFML1Q6UWY5 402 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 RNF19BQ6ZMZ0 732 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 C4orf33Q8N1A6 199 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 VPS52Q8N1B4 723 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 ZCCHC9Q8N567 271 aaKnown RBP14.09□□□□□ -0.15
COPS7B-221ENST00000488111 FBXO22Q8NEZ5 403 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 SKA1Q96BD8 255 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 HSFY1Q96LI6 401 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 PLEKHG4BQ96PX9 1271 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 HERPUD2Q9BSE4 406 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 SSU72Q9NP77 194 aaKnown RBP14.09□□□□□ -0.15
COPS7B-221ENST00000488111 TAS2R1Q9NYW7 299 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 CFAP69A5D8W1 941 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 F8W8V4 182 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 H7C4K7 107 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 SOAT2O75908 522 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 FGF18O76093 207 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 OR1D2P34982 312 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 TKTL1P51854 596 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 SLC6A3Q01959 620 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 IFRD2Q12894 506 aaPredicted RBP14.09□□□□□ -0.15
COPS7B-221ENST00000488111 RASA2Q15283 850 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 LLGL1Q15334 1064 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 MARK2Q7KZI7 788 aaKnown RBP14.09□□□□□ -0.15
COPS7B-221ENST00000488111 ANKS1BQ7Z6G8 1248 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 PHOSPHO2Q8TCD6 241 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 MTIF3Q9H2K0 278 aaKnown RBP14.09□□□□□ -0.15
COPS7B-221ENST00000488111 CSNK1G1Q9HCP0 422 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 PREBQ9HCU5 417 aa14.09□□□□□ -0.15
COPS7B-221ENST00000488111 HHLA1C9JL84 531 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 KRT15P19012 456 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 CRABP2P29373 138 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 CA8P35219 290 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 CETN2P41208 172 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 RPL34P49207 117 aaKnown RBP14.08□□□□□ -0.16
COPS7B-221ENST00000488111 VPS41P49754 854 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 DSG1Q02413 1049 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 THOC5Q13769 683 aaKnown RBP14.08□□□□□ -0.16
COPS7B-221ENST00000488111 DDR2Q16832 855 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 TRNP1Q6NT89 227 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 LVRNQ6Q4G3 990 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 TNS4Q8IZW8 715 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 ZNF276Q8N554 614 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.08□□□□□ -0.16
COPS7B-221ENST00000488111 KHSRPQ92945 711 aaKnown RBP eCLIP14.08□□□□□ -0.16
COPS7B-221ENST00000488111 RBM15Q96T37 977 aaKnown RBP eCLIP14.08□□□□□ -0.16
COPS7B-221ENST00000488111 ECSITQ9BQ95 431 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 CRISPLD1Q9H336 500 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 HEY2Q9UBP5 337 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 PCDHB5Q9Y5E4 795 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 NR2E3Q9Y5X4 410 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 LAMA3Q16787 3333 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 PROSCO94903 275 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 ARHGEF15O94989 841 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 PABPC4LP0CB38 370 aaKnown RBP14.08□□□□□ -0.16
COPS7B-221ENST00000488111 PIM1P11309 404 aaPredicted RBP14.08□□□□□ -0.16
COPS7B-221ENST00000488111 AMPD1P23109 780 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 ACADSBP45954 432 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 NFE2Q16621 373 aaPredicted RBP14.08□□□□□ -0.16
COPS7B-221ENST00000488111 FAM91A1Q658Y4 838 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 IZUMO2Q6UXV1 221 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 DDX53Q86TM3 631 aaKnown RBP14.08□□□□□ -0.16
COPS7B-221ENST00000488111 SIX6OS1Q8N1H7 587 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 PDCD7Q8N8D1 485 aaKnown RBP14.08□□□□□ -0.16
COPS7B-221ENST00000488111 CCDC89Q8N998 374 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 SCAMP5Q8TAC9 235 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 GPR152Q8TDT2 470 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 KCTD13Q8WZ19 329 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 ULBP1Q9BZM6 244 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 GALNT8Q9NY28 637 aa14.08□□□□□ -0.16
COPS7B-221ENST00000488111 DCTN4Q9UJW0 460 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms